Gene Nmar_0135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0135 
Symbol 
ID5774320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp124078 
End bp124836 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content25% 
IMG OID641315755 
Productacylneuraminate cytidylyltransferase 
Protein accessionYP_001581473 
Protein GI161527647 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1861] Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000000052261 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAATTCT GTAATGTTGG TATAATTATT CAAGCAAGAA CTGGTTCTGA TAGATTCCCA 
AAAAAGGTTC TTGCATCTAT TGAAAAAAAA CCTATGATTT GGCATATTGT CAATAGATGC
AAAAAAGTCA AAAATATTGA TAAAATTATT TTGGCTACTA CAACACTAAA AGAAGACTAT
CCTTTAATTT CATTAGCAAA AAAAAATAAG ATAGAATATT TTCGTGGTTC TAAGAATGAC
GTGTTAGATA GATTTTACCA ATGTTCAACT TCAAATAATT TAGATATCAT AATACGAATA
ACAGGAGATT GCCCCTTAGT AGATCCAAAA CTAATTGATC AATTTTTAGA TTTTTTCTCT
CATAAAAAAT ATGATTATGT TAGTAATACT ATTAATCCAA CATATCCTGA TGGTCTCGAT
ATAGAAATTT TTTCCTTTAA AGCATTAAAA AAAGCATGGA ATATGTCTAA AAAAAAATCA
AATAGGGAAC ATGTTACTAC ATTCATAAAA CATCATCCTG AAAAATTTAA AATTAAAAAT
TTTGAAAATA ATACTAATTT ATCAAATTAT AGATTGACTG TAGATCATAA AAATGATCTA
AAATTAATTC GGAAAATTTA CAAAGAATTT CGTCCTAACA TTAAATTTAG TACCAAATCA
GTAATTTCAT TGTTAAACAA AAATCCTGAA TTATTCAAAA TCAATCAGAA CATATCTAGA
AATGAAGGTT ATGAAAAATC TCTTTTAAAT GATAACTAA
 
Protein sequence
MKFCNVGIII QARTGSDRFP KKVLASIEKK PMIWHIVNRC KKVKNIDKII LATTTLKEDY 
PLISLAKKNK IEYFRGSKND VLDRFYQCST SNNLDIIIRI TGDCPLVDPK LIDQFLDFFS
HKKYDYVSNT INPTYPDGLD IEIFSFKALK KAWNMSKKKS NREHVTTFIK HHPEKFKIKN
FENNTNLSNY RLTVDHKNDL KLIRKIYKEF RPNIKFSTKS VISLLNKNPE LFKINQNISR
NEGYEKSLLN DN