| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0134 |
|---|
| Symbol | |
|---|
| ID | 5774348 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | + |
|---|
| Start bp | 123483 |
|---|
| End bp | 124076 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 641315754 |
|---|
| Product | methionyl-tRNA formyltransferase-like protein |
|---|
| Protein accession | YP_001581472 |
|---|
| Protein GI | 161527646 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000000000035681 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | GTGATTGATA TTGTTTGTTT TTTATCTAGG CCTCATGGAT TTGCGGTACT AGAAAAACTA
ATTAAAATAA AAAAATTTAA CATATTAAAA TTATACACAC ATTCTTTAAA TCCAAAATCC
CAAGATCCAA ACAGATCAAT TAGAACTGAT TTTAAATTAT TTCAACAAAT ATGTGAACAA
AATAATATAG ATTTAGAATC AATTGATTCA AAAGAATCTG AAATTACTTC TTTCCCAAAC
TGTGATTATA TAATAGAAGT TTCATGGCGT TATTTAATTC CCACAAAAAT TTTATCACTA
GCTAGAAAAG ACGCATTTGG AATACATCGA GGTAAATTAC CTGATTATGC AGGTGCAGAA
CCAATAAAAC AAGCATTGTT AAAAAATGAT AATAAAATTA TTCTGTCTGC CCATTATTTA
GCTAATAAAA TTGACATGGG AAATGTCATA GATACTGTAG AACATGATGT GAATTATGAT
AAAAGTAAAT CTTTTGAGGA AAATATTCAG AGACTTAGAG ATGAAATAAC ACCATTTTTC
CCTCAATTGG CAATATCTGC AATAAATGTA TTAGAAGAAA AAAATTCTGA TTAA
|
|---|
| Protein sequence | MIDIVCFLSR PHGFAVLEKL IKIKKFNILK LYTHSLNPKS QDPNRSIRTD FKLFQQICEQ
NNIDLESIDS KESEITSFPN CDYIIEVSWR YLIPTKILSL ARKDAFGIHR GKLPDYAGAE
PIKQALLKND NKIILSAHYL ANKIDMGNVI DTVEHDVNYD KSKSFEENIQ RLRDEITPFF
PQLAISAINV LEEKNSD
|
|---|
| |