| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0122 |
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| Symbol | |
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| ID | 5773183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 111720 |
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| End bp | 112664 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 641315742 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001581460 |
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| Protein GI | 161527634 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000000000109546 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGATATTG TGAAGGTATT GCTTACTGGC GCAAATGGAT TTATTGGAAG CCATTTGGCT
GATTATCTGT ATAATAATTA TGATATTTTT TTGGCCGTAA GAGAATTCAG TAATATCTCT
AACATAAACC ATTTGAAAGA TAAAGTAAAT CTTTCTAAAT TAGATATTAC AAATTTTAAA
GAAATACAAA ATTTGTTAAA TGAAATAAAA CCTGATGTAG TTATTCATTT AGCTGGAGAA
ACCTCTCACT CAAAAAGTTT TGAAGATCCT ATTCATGATG TAGAAGTTAA TTCAAAATCA
ACATTATATT TTTTGGAATC AATTCGAAAA TTACAATTAA AATGTACTTT TATTTTAGGT
AGCACATTCA TTGTTATAGG GAAACCCATT TCTTTACCTG TAAATGAGAA ATCAGTTTGT
ATTCCAACAA CAATCTATGC AACAAATAGA TTGAGTAGTG AACATTTTTG TAAAATTTAT
CATCAAGTAT ATGATATGGA TTGTAGAATA TTTAGAATAA CAAATTCCTT TGGTCCTAGA
GAAAAAACTA TTTCATCAAA AAATGCTGTA AACTTTTTAA TTTATCAAGC ATATAGTGGA
AAAGAGATTA CTGTCTTTAA TGATGGAGAA TTTTTTAGAG ATCTTATCTA TGTGAAAGAT
GTAGTTTCAG GAATTGAGAC AATTATGAAA AATGGAAAAA ATGGTGAACT CTATTGGATT
TCTTCACATC AAAAAACATG GTTTAAAGAA TTCGGTAAAA TACTTCATGA ATTAACAAGC
TCGCCTCTAA ATTTTATTCC ACCTCCAGAA TACACTAAAA AAGTGGATGT GGGAAATTTT
TTAGCTGATA ATTCCAAACT GAAATCATTG GGATGGGAAC CAAAGTATTC CTTGAGAGAT
GGGATTATTG AAACTTTAGA TTATTTTAAA AACAAAAAAT TATAA
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| Protein sequence | MDIVKVLLTG ANGFIGSHLA DYLYNNYDIF LAVREFSNIS NINHLKDKVN LSKLDITNFK
EIQNLLNEIK PDVVIHLAGE TSHSKSFEDP IHDVEVNSKS TLYFLESIRK LQLKCTFILG
STFIVIGKPI SLPVNEKSVC IPTTIYATNR LSSEHFCKIY HQVYDMDCRI FRITNSFGPR
EKTISSKNAV NFLIYQAYSG KEITVFNDGE FFRDLIYVKD VVSGIETIMK NGKNGELYWI
SSHQKTWFKE FGKILHELTS SPLNFIPPPE YTKKVDVGNF LADNSKLKSL GWEPKYSLRD
GIIETLDYFK NKKL
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