Gene Nmar_0095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0095 
Symbol 
ID5774000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp83839 
End bp84402 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content28% 
IMG OID641315714 
ProductGrpE protein 
Protein accessionYP_001581433 
Protein GI161527607 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0826396 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCAATG ATAATGAATC GGATGAAATT CCTGTAAATG TTGTAACTGA GAATAAAGAT 
GATGAACCTA AAAAAGAATC TGAATCTTTA GAAACAGTTC AAGAAAATTT TTCAGAGTTA
TTGGATGCAG AAAAACAAAA AACTTCAGAA TGTGAAGAAA AATTAAAACA TATTTTAGCC
GATTTTCAAA ATCTTACTAG AAAAACACAA TCTGACATTC AAAATGGTGT TAATGCTAAA
GTTGATGAAT TTCTATTAGA TTTTCTAAAA ATCTATGATG ATTTCATTCG TGCTAGAGAT
GTATTTTCTG AAAATAAAAT CAACACTGAA GGTCTTGATT CAATTTTAAA AAATATGGAT
TCTTTATTGA AAAAATATAA TGTAACTGCA ATTGATGCGT TGGGGGAAAT TTTTGATCCT
AATCATCACG AAGCTATATC TGTAATCACT GATCCTGATT TAGATGACAA TACAATTACC
AAAGAGATCA GGAAGGGATA TATTTCTCAA AACAGAGTCA TAAGAACAAC ATTAGTAGAA
ATTTCAAAAA AGGATGATAA TTAA
 
Protein sequence
MSNDNESDEI PVNVVTENKD DEPKKESESL ETVQENFSEL LDAEKQKTSE CEEKLKHILA 
DFQNLTRKTQ SDIQNGVNAK VDEFLLDFLK IYDDFIRARD VFSENKINTE GLDSILKNMD
SLLKKYNVTA IDALGEIFDP NHHEAISVIT DPDLDDNTIT KEIRKGYISQ NRVIRTTLVE
ISKKDDN