Gene Nmar_0067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0067 
Symbol 
ID5773199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp55201 
End bp58062 
Gene Length2862 bp 
Protein Length953 aa 
Translation table11 
GC content35% 
IMG OID641315684 
Producthypothetical protein 
Protein accessionYP_001581405 
Protein GI161527579 
COG category[S] Function unknown 
COG ID[COG1615] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTTTGT ATAGCGCCTC TACTGATAAG CAGACTCCTC CTCCTGATGC TGGAAAATAC 
ATCAGATTAG GTATTATTGC AATCATTGGT ATTGTTATTT TTGCAATTGT GGGAAATCAG
GCAGTTATTT TATCGATGAA TTTTACAGAA TTTGGCGATC AATTTACCAA GCCTCTCTAT
TACACACTTG TATCTACTAT TATTTTAGCT GCCATTGCAT TAGTTCGTGT TAATATCGCT
GGACGATCTT CTATTTTCTG GTATGCAATT AATACTGCAA TTGGATTTTT AGGTCGAAGT
GGACAACAAC CAATAACTAA TGCTGTACCT AGTTTTAGAG ACTACAAATT AAGTTCAGGC
CAATTTATTC TCTGGCAAAT TACCAAAATT TTCCTCTTTG GTGCATTCTT TGCAAATATC
ATGTTTGGAT TTGCTGCAAT GTCGTTTATT GATGGCAATT ATCTTGGAAT AGAAAATCTA
CCAAAATTAT TTTCATTACC ATTTGTAACT CCCGAAACTG ATCCAAATTA TGCTGCAGAA
AACGTAGTTC CAATGATACC TGCATTAGTA ATTTTGATAC CTCCAATACT TGCTGCAATT
GGATTACGTT TAGTTTTGTA TGTTGGCTTG CACAGAATAA TTAATGTAAT CACTTCATTT
CTTCAAGACT CTAATGAAGG CAAACCCAGA TACCTAAATT ATGTTTCTAC CATTGAAGGA
ATAATTGGTA TTGGAATACT CTGGGCAGGA TTCAATCTCT TTTTCACTGA TCAAATCGAT
TATAACACAA GATATGTCAT CGGTGGTACA CTTGTTATTG GTTCTGCATT AATTGCATTT
TCAGTAGTTG ATAGGATTAG AGCACGTGTT CTAACTCATA TGTTTAAGAG AGATGTATAC
ATTAGAATTC TTACAATAAT TGCAATTGCA ATAATTATTG CGGGTGTTGT TTCTGTAAAT
AATAGCATTG CCGATGCAAA AAAGATTGAA TTTTTGGGAC CATATACTGC CCAACAAATT
GGTGTGAACA GATATCTTGG TGAACTAAAT AATATACAAG AAAACACACA TGATGTCCAA
CTCACATCTG TTTCTCCAAA CAATATCAAG AATTATGTCT CTCAAAACAG CGATGTTTTA
GATGTAATTC GAGTTTGGGA CTGGGAAGCA GCTTTTGCCA AATTAAAACC TGAAATTGGT
TTGATCCCTT ATGTTGACTT TGAAGATAAT GATATTTTGA GATTTAACAA TACTTTGTAT
TGGACAGCCT CCATGAAACC AATTCTTCCA ACCTCTGTTA GCCTTGAAAA TAGATGGTAC
AATGAGCATT TTGTATATAC ACATGTTCCA GAAGGATTCC TTACTTTAGA AGCAACAGAC
GGACAAATTG TTGATAGTGA GCAGTTTTTC AAACAAAGAG AAATTTACTA TGGTGAAGGC
GGTTTATTTG AACAAACCTG GTCAGGTTAT CCTAATTCTA GGGGATCTGA AAGCGCAGAA
CTTGGTGGCG TTTCATATTC TGGATTAGGA GGATTAGATG TTTCACCTCC ATTGAGTTGG
ATATTTGAGC CAAACTTTTT GCTTTCATTT CCAGGAGAAT CTGTTCATAT CATGAGATAC
AAAGATGTTC ATGATAGAAT GCAAACACTG TATCCTTATT TCCTCTATGA CTTGTTTGGT
AAAGAACTAG ATTCACTTCC TGTTACTGAT GGTGAAAACT CCTATTGGTT AATTCCATTA
ATCATTGGAT TTGATACACG AGATGTTCCA TGGTCTGTTG GAAATCCATA TTTGCGTTTA
GTTGGATATG CTCTTGTTGA TTCATACGAT GGTGACATTC AATTACTAAA GACAGGAGAT
GATTTCTTTA CAGAAATGTT TGCAAGTCAA TATGAAGAAC AATTCCAACC AATGCCTGCT
TGGTTAGAGG AACAGATCAG ATATCCTGTT GAGTTATTCA ACTGGAAGAC TGAGATGTAC
AATGTTTACC ATGTCACAAA TGTTGAAACA TTCATCCAAG CAAATGAATT TTATGAGATT
CCTCGTGGTC TTGATACCTA TTATGTTGAG GCAAAACCAC CAGGATTTGA TCAAACTGAA
TTCTTAGGCT TATTATCATT AGAATTACGT GGATCTGAAG GAAGAAACCT TGCTGGATAT
ATGGTAGTTG AAAACGATCT TACTAATCTA GGAGACTTGC AGTTCTATGA AGTTCCATTA
GATTCTGAAA CAAAACTAAT TGGTCCAACC GCAGTTAGAG AAGCACTCGA TAGAGATCCT
GAATTTGCTC AATTAAAGAC ATTATTGAGA AATCCAAGAA TTGGTGATAA TATTCTCTAC
AGGGTAGGTG CTCATGATGT TTACTTTATT CCTGTTTATA CTGCTGGTGC TGGTGGTGTA
GTTGCACAAT TAGGAACAAT TGCAGCTGTA GGTGCTGCAT TTAATGGAGA ATACTTTGTT
GGATTGGGAG ATACTCAAGA ACAAGCATTT GAAGCTTATC TGAAGAAAGT TTCAGGCGTA
GCAGGTTCTA TTACAGTAGC TGATGAGAAT TATGTTGAGC TAGACAGAAA TGATAGAATC
GAAATCATCA AGAAAGTATT CGAAGAAAAT GAAATTACTA TATCTGAACC TACATCAATA
CAAATTCCAT TATCATTCAA TGAAGGAGAA TTGTTCTTCT TTACTGAAAA TGAACGTGAA
GAAACTGTAG AATTCTTGTC CCAGTTTATT GATGACTTTG TAAAACCACG AAGTGATAGA
GTATTCATGT GGCAAGAAGA AAATAATCTC AATATCGGAA CAATATATGT CAAGGATGGT
ATATCTGAGA TTCATTATGT TTCAATTGAG GTAGGCAGCT AA
 
Protein sequence
MILYSASTDK QTPPPDAGKY IRLGIIAIIG IVIFAIVGNQ AVILSMNFTE FGDQFTKPLY 
YTLVSTIILA AIALVRVNIA GRSSIFWYAI NTAIGFLGRS GQQPITNAVP SFRDYKLSSG
QFILWQITKI FLFGAFFANI MFGFAAMSFI DGNYLGIENL PKLFSLPFVT PETDPNYAAE
NVVPMIPALV ILIPPILAAI GLRLVLYVGL HRIINVITSF LQDSNEGKPR YLNYVSTIEG
IIGIGILWAG FNLFFTDQID YNTRYVIGGT LVIGSALIAF SVVDRIRARV LTHMFKRDVY
IRILTIIAIA IIIAGVVSVN NSIADAKKIE FLGPYTAQQI GVNRYLGELN NIQENTHDVQ
LTSVSPNNIK NYVSQNSDVL DVIRVWDWEA AFAKLKPEIG LIPYVDFEDN DILRFNNTLY
WTASMKPILP TSVSLENRWY NEHFVYTHVP EGFLTLEATD GQIVDSEQFF KQREIYYGEG
GLFEQTWSGY PNSRGSESAE LGGVSYSGLG GLDVSPPLSW IFEPNFLLSF PGESVHIMRY
KDVHDRMQTL YPYFLYDLFG KELDSLPVTD GENSYWLIPL IIGFDTRDVP WSVGNPYLRL
VGYALVDSYD GDIQLLKTGD DFFTEMFASQ YEEQFQPMPA WLEEQIRYPV ELFNWKTEMY
NVYHVTNVET FIQANEFYEI PRGLDTYYVE AKPPGFDQTE FLGLLSLELR GSEGRNLAGY
MVVENDLTNL GDLQFYEVPL DSETKLIGPT AVREALDRDP EFAQLKTLLR NPRIGDNILY
RVGAHDVYFI PVYTAGAGGV VAQLGTIAAV GAAFNGEYFV GLGDTQEQAF EAYLKKVSGV
AGSITVADEN YVELDRNDRI EIIKKVFEEN EITISEPTSI QIPLSFNEGE LFFFTENERE
ETVEFLSQFI DDFVKPRSDR VFMWQEENNL NIGTIYVKDG ISEIHYVSIE VGS