Gene Nmar_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0040 
Symbol 
ID5774765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp30578 
End bp31252 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content35% 
IMG OID641315657 
ProductExsB family protein 
Protein accessionYP_001581378 
Protein GI161527552 
COG category[R] General function prediction only 
COG ID[COG0603] Predicted PP-loop superfamily ATPase 
TIGRFAM ID[TIGR00364] exsB protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG CAGTAGTTGT TTTTAGTGGA GGAGTTGACT CTGTTTGTGC AGTATCATTT 
CTAAAATCAA AGTACGAGTT GTATGGAATT ACTTTTTCAT ATGGTCAGAA AGCAAACATG
GAGATTTCTG CTACAAAATC ATTTGCAAAG AAATTAGGAC TAAAACAGCA CAAGATTATC
GATATTGGTT TTATGAAAGA GTTGTACGGT GACTCTAATG TCTTGACTAG CTCAAAAAGA
AAGATTCCAA GCAAATTTGA GTACTCTATA GTAGTACCAA TTAGAAATGC AGTGTTTCTC
TCAGTTGCAT CTGCATGGGC ATATACCCTA AACGCATCCC TAGTCGTTTA TGGTGCACAT
ACAGGAGACA AGTACTATCC GGATTGCAGA CCTGCCTTTG CAAAGAAACT AGAATCAGCA
TTCAATCAAG GCGAGATTGA TGGGATTAAT TCAAAAATAA GAAAAAAGAT AAAGATTTGG
TCTCCATACA GAGAAGGGTT ATCAAAAAGT GACTTGTTAA AGAAAGGAAA GAAAGTGTTA
GGTGATTCCA TCTTTAGAAC TTGGAGTTGT TATTCAAACA AAAAACTGCA TTGTGGTGTT
TGTGAGTCTT GCAATAATAG AAAGATTGCA TTTGAGAAAG CAGGAGTTAC AGACAAAACA
AAATATCTAA AATAA
 
Protein sequence
MKKAVVVFSG GVDSVCAVSF LKSKYELYGI TFSYGQKANM EISATKSFAK KLGLKQHKII 
DIGFMKELYG DSNVLTSSKR KIPSKFEYSI VVPIRNAVFL SVASAWAYTL NASLVVYGAH
TGDKYYPDCR PAFAKKLESA FNQGEIDGIN SKIRKKIKIW SPYREGLSKS DLLKKGKKVL
GDSIFRTWSC YSNKKLHCGV CESCNNRKIA FEKAGVTDKT KYLK