| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0020 |
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| Symbol | |
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| ID | 5773786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 16889 |
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| End bp | 17794 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641315637 |
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| Product | transcription factor TFIIB cyclin-related protein |
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| Protein accession | YP_001581358 |
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| Protein GI | 161527532 |
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| COG category | [K] Transcription |
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| COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAGTA AAACAAAAGA ACTCTGTCCA AGATGTGCAC AGGGAAAATT AGTAACTGAT
AATGAATCTG GAGAAATGTT TTGCTCCAAA TGTGGTTTTG TAATTACTGA AAAATTACAA
GAGGCAGGTC CAGAATGGCG TTCTTTTACA CAAGATGAAC ATGGAGATCG AGCAAGAGCA
GGAGCTCCTA CTTCATTAAC AATGCATGAT ATGGGTCTTG CAACAATTAT CAATCCAGTA
AACAAGGATG CATCTGGTAG ACCACTTACA GCTTCAATGA AAAGTACCAT TGAGAGATTA
AGGACCTGGG ATAGTAGAAG TCAGGTTCAT GAACCAGTTG ACAGAAACTT TAGACAAGCA
TTTAGTGAAT TAAACAGACT AAAAGATAAA CTAGCAATTT CTGATGCAGT AATTGAAAAG
GCAGCTTACA TTTACAGAAA AGCCCTTGAC AAAGGACTTG TTAGAGGCCG TTCTATTTCA
GCACTAATGG CATCAGCACT TTATGCTGCA TGTCGTGATA CTGAAACTCC AAGAAATCTC
AAAGATGTAG AGCAAGCAGC AAATATCAAA AGAAAAGATA TCGCAAGATG TTACAGATTA
CTCGTTAAAG AACTTGATTT GAAGATGCCA GTTACAGATT CAATTCAATG TGTTGCAAGA
ATTGCAAGTA GAATTGGAAT TGCAGAGAAA ACAAAAAGAT ACGCAGTCAA AGTTCTCAAA
AAAGCACAAG AAAATGAGGT TTCTGCAGGA AAAGATCCTA TGGGATTAGC TGCTGCAGCA
TTATACCTAT CATGTGTCAA AAATGGTGAG GATAAGACTC AAAGAGACAT TGCAGAGGCT
GCAAATGTAA CTGAAGTTAC TATCAGAAAC AGGTACAAAG GACTCAAAGA GTCACTTGAA
CTATAA
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| Protein sequence | MVSKTKELCP RCAQGKLVTD NESGEMFCSK CGFVITEKLQ EAGPEWRSFT QDEHGDRARA
GAPTSLTMHD MGLATIINPV NKDASGRPLT ASMKSTIERL RTWDSRSQVH EPVDRNFRQA
FSELNRLKDK LAISDAVIEK AAYIYRKALD KGLVRGRSIS ALMASALYAA CRDTETPRNL
KDVEQAANIK RKDIARCYRL LVKELDLKMP VTDSIQCVAR IASRIGIAEK TKRYAVKVLK
KAQENEVSAG KDPMGLAAAA LYLSCVKNGE DKTQRDIAEA ANVTEVTIRN RYKGLKESLE
L
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