Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bmul_0514 |
Symbol | ipk |
ID | 5765682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia multivorans ATCC 17616 |
Kingdom | Bacteria |
Replicon accession | NC_010084 |
Strand | - |
Start bp | 562893 |
End bp | 563774 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641312928 |
Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
Protein accession | YP_001578706 |
Protein GI | 161523694 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000372981 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATT CGACCCGCTC GCTGCGCAAC TGTCTTGCGC CCGCGAAACT CAACCTGTTC CTGCATATCA CCGGCCGCCG GCCGAACGGC TATCACGACC TGCAGAGCGT GTTTCAGCTG CTGAACTGGG GCGATACGCT GCACTTCACG CTGCGCGACG ACGGCAAGGT CGCGCGTGCG ACCGACGTGC CGGGCGTGCC CGAGCAGAGC GATCTCGTCG TACGCGCGGC GAACCTGCTG AAGGCGCACA CGGGCACCGC CGCAGGCGTC GACATCGAGA TCGACAAATG CCTGCCGATG GGCGCCGGAC TCGGCGGCGG CAGCTCCGAT GCCGCGACGA CGCTGCTTGC GCTGAACCGT CTATGGCAGC TCGATCTGCC GCGCGCGGAA TTGCAGTCGC TCGCGGTAAA ACTCGGCGCC GACGTGCCAT TTTTCGTTTT TGGAAAAAAT GCGTTCGCAG AGGGTATCGG AGAAGAATTA GCTGAGGTAG AATTGCCGAC TCGCTGGTTC CTGGTTGTGA CGCCACGCGT TCATGTCCCG ACCGCTGAAA TTTTTTCAGA TGAGTTGTTG ACAAGAGATT CGAAGCCAGT CACAATTACG GACTTTCTTG CACAGCAAAG CAGCGATGCG AGATGGCCAG ACAGTTTCGG CCGGAACGAC ATGCAGCAAG TTGTGACAAG CAAGTACGCG GAAGTTGCGC AGGTGGTCAA ATGGTTGTAT AATGTGGCCC CCGCGAGGAT GACCGGCTCC GGAGCAAGCG TGTTTGCAGC GTTTCAAAGC AAACAGCAGG CAGAAGCGGC GAAAGCCCAG TTGCCCGCCG GCTGGAACGG CGCAGTTGCC GAGAGCCTGA ACGAGCATCC GCTCTTCGCT TTCGCGTCAT GA
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Protein sequence | MTDSTRSLRN CLAPAKLNLF LHITGRRPNG YHDLQSVFQL LNWGDTLHFT LRDDGKVARA TDVPGVPEQS DLVVRAANLL KAHTGTAAGV DIEIDKCLPM GAGLGGGSSD AATTLLALNR LWQLDLPRAE LQSLAVKLGA DVPFFVFGKN AFAEGIGEEL AEVELPTRWF LVVTPRVHVP TAEIFSDELL TRDSKPVTIT DFLAQQSSDA RWPDSFGRND MQQVVTSKYA EVAQVVKWLY NVAPARMTGS GASVFAAFQS KQQAEAAKAQ LPAGWNGAVA ESLNEHPLFA FAS
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