| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1905 |
|---|
| Symbol | |
|---|
| ID | 5758088 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 2111076 |
|---|
| End bp | 2112119 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641303101 |
|---|
| Product | ribosomal RNA large subunit methyltransferase N |
|---|
| Protein accession | YP_001568915 |
|---|
| Protein GI | 160903334 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
|---|
| TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0212666 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACAA AAAACATTTT AGATTTTGAA TATTCAGACT TGCAAAGTTA TTTGCTCAAT
GAATTGGGAC TTGAAAAGTT TAGAACTGAT CAAATTTGTG ATTGGATTTA TAAGAAAAGA
GTTTTTGATT TCGAATCGAT GACTAATTTA TCTAAAGACG ATAGACAAAA ACTCAGTGAT
AATTTTAAAA TATCTATTCC TCATATTGTT AAAAAAGAGG TTTCAAAGAT AGATGGAACC
ACCAAATATC TTTTGGAGTT AGAGGATAAG AACACTGTTG AAGCGGTAAT TATTTACTAC
CCTTCAAGAA CGATAGCTTG TATATCAACA CAAGTTGGTT GCCCACTGAA ATGTTCTTTC
TGCTCTACAG GACAAAGCGG TTACGTTAGA AATTTATCGA CAGGTGAGAT CATTGGTCAA
CTGTTAGCTA TGGAAAAAGA TAAAGAGATG GATGTAAAAA ATGTTGTATA CATGGGAATG
GGTGAACCAT TATTAAATTT TAACAACGTT GTTCAAACCA TAGAGATATT AAACCATCCA
AAGATGAAAA AGTTAGGGGC AAGGCATATA ACCATTTCAA CCGCGGGAAT TCCTCAGAAA
ATTGAGGAAG TAGGTGATTT GAACAAAGAG TTTCGACTTT CTGTTTCACT TCACGCACCA
ACGAATCTTC AAAGAGATCA AATAATGCCA ATAAATCATA AATATCCGGT AGAGCAGGTT
ATTCAGTCAT GCCGAATTTA TCAGAAAAAA ACAAAAAAGA GGGTTACTTT TGAGTATATT
TTGATAAAAG GATTTAATGA TTCAAAAGAG GACGCTTTGA AATTAGTTGA ACTATTTGGT
GATTTGAAAG TGATGGTTAA TTTAATTCCT GTCAATGAAA ATCCAGCGGG CTTTGAAAAG
CCGTCAAAAA GGTTTATTCA AGCTTTTTTG GATACTCTCG TTAAGAACGG AATTGATGCT
GTGGTGCGAG CTGAGAAAGG TAGTGATATA TCAGCCGCAT GTGGCCAATT AAGAACTAGA
GAGTTAAAAG AAGCTAATAG GTGA
|
|---|
| Protein sequence | MQTKNILDFE YSDLQSYLLN ELGLEKFRTD QICDWIYKKR VFDFESMTNL SKDDRQKLSD
NFKISIPHIV KKEVSKIDGT TKYLLELEDK NTVEAVIIYY PSRTIACIST QVGCPLKCSF
CSTGQSGYVR NLSTGEIIGQ LLAMEKDKEM DVKNVVYMGM GEPLLNFNNV VQTIEILNHP
KMKKLGARHI TISTAGIPQK IEEVGDLNKE FRLSVSLHAP TNLQRDQIMP INHKYPVEQV
IQSCRIYQKK TKKRVTFEYI LIKGFNDSKE DALKLVELFG DLKVMVNLIP VNENPAGFEK
PSKRFIQAFL DTLVKNGIDA VVRAEKGSDI SAACGQLRTR ELKEANR
|
|---|
| |