Gene Pmob_1878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1878 
Symbol 
ID5757536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp2075116 
End bp2075628 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content34% 
IMG OID641303073 
ProductCRISPR-associated Cas4 family protein 
Protein accessionYP_001568888 
Protein GI160903307 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID[TIGR00372] CRISPR-associated protein Cas4 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGATA ATATCATTAC AGGATATTCA GTTTTAGCCT ATTCAATATG CCCAAGAGAA 
GCTTGGTTTG TTTTAAGAAG ATTCACTCCT GAACAAGATA ACCCCTACAT AGAACTAGGA
AGGTTTTTAC ACAAAAATTC TTATGAAGGG AAAGGAGAAA AAGAAATAAA GCTTCCAGGA
GCTGTAATTG ATTTAATTTG GAATGATAAT AAGTGTACCA TAGTTGGAGA AATCAAAAAA
TCTTCGAAAT CTTTCAAAGG AGCCAAAATC CAGTTGTTAT ATTATTTAAA ATTATTGGAG
GATATGGGTA TTCAAGCAAA GGGGGAAATT CTATTGCCAA AAGAAAAAAA GAGAATTCCC
ATTGTGTTCG ATGAGGAAGC CAAAAAAGAA ATACAAGATA CACTTCTTAA ACTCAATGAA
TTAATTGAAT CGCCTATTCC ATCTCCACCA AAATGGATAG GAGTGTGTTC AAAATGTGGC
TTTGCAGAAT TATGTTGGGC GGGAGAGGAA TAA
 
Protein sequence
MDDNIITGYS VLAYSICPRE AWFVLRRFTP EQDNPYIELG RFLHKNSYEG KGEKEIKLPG 
AVIDLIWNDN KCTIVGEIKK SSKSFKGAKI QLLYYLKLLE DMGIQAKGEI LLPKEKKRIP
IVFDEEAKKE IQDTLLKLNE LIESPIPSPP KWIGVCSKCG FAELCWAGEE