| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1700 |
|---|
| Symbol | |
|---|
| ID | 5757415 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 1859665 |
|---|
| End bp | 1864155 |
|---|
| Gene Length | 4491 bp |
|---|
| Protein Length | 1496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641302891 |
|---|
| Product | carbamoyl-phosphate synthase, large subunit |
|---|
| Protein accession | YP_001568716 |
|---|
| Protein GI | 160903135 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism
[I] Lipid transport and metabolism |
|---|
| COG ID | [COG0137] Argininosuccinate synthase
[COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ)
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00032] argininosuccinate synthase
[TIGR01369] carbamoyl-phosphate synthase, large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAAAA AACGTGAAAT AAAAAATGTT TTAGTTATAG GTTCTGGACC AATAATAATA
GGTCAAGCAG CAGAATTCGA TTATTCAGGA ACCCAAGCTT GTAAATCTTT AAAAGAAGAA
GGATGTAAAG TAATATTGGT AAACAACAAT CCTGCAACTA TTATGACTGA TACAGAAATA
GCAGATGTAG TTTATATGGA AAACCTTGAA ATGGATACTT TAATTTCCAT TATAGAAAAA
GAAAAACCGG ATGGGATTTT AGGAACACTT GGAGGACAAA CAGCCTTAAA TCTAATTATC
CAATTAAAGG ATAGTGGAAT TATCGATAAA TACGATATTC AAGAATTGGG AACATCGGTT
GAATCCATAA AAATAGCAGA AAGTAGAGAA TTATTTAAAA GAAAAATGCA AGAAATTGAA
GAACCTATCG CTGAAAGCCT CACGGTGTCG ACAGTATCCG AAGCCATAAA TTTTGCTAAC
AAAGTTGGGT ATCCTTTGAT AATACGCCCA GCATACACTT TAGGAGGAAC AGGTGGTGGA
TTTGCTTACA ACGAAGAGGA GTTAATAGAA TTTGTAGAGA ATGGGTTGAA AAAGAGCATG
ATGAAAGAGG TCTTAATAGA AAGATCCTTA TTGGGTTGGA AAGAGATCGA ATACGAATTG
GTTAGGGATT CTTTTGATAA TTGCATCACC GTATGTAATA TGGAAAATTT TGATCCTGTA
GGAATTCACA CCGGAGATAG TATAGTTGTT GCACCTTCTC AAACGTTGAC AGATCAAGAA
CATCAAATGT TAAGGGACTC ATCCATTAAG ATAATAAAAG CTTTAAAGAT AGAAGGTGCT
TGCAATATTC AATTTGCCCT CAATCCTTAT AACGAAGAAT ATCGAGTTAT TGAAGTGAAT
CCTCGTTTGA GTAGATCCAG TGCCTTAGCG TCCAAAGCAA CGGGGTATCC TATAGCAAAA
ATTGCTACAA AAATCGCAAT AGGATTTTCT TTGGATGAGA TAAAAAATCC CGTTACTGGA
AAAACAACAG CTTTTTTTGA ACCATCTTTA GATTATGTTG TCACAAAGAT CCCCCGCTGG
CCTTTTGATA AGTTTTATCA AGCTGATAAA AAGATAGGTA CACAAATGAA ATCCACTGGT
GAAACGATGG CTATTGGACG TACCTTTGAA AGTTCTTTAT TAAAGGCGGT ACGCTCTCTT
GATATGAAAA TTAAAGGCTT GAGAATTAAA GAGGTTCAAA AAGAGAGCGA TGAAGAATTA
GTAGAACATT TACAAATTCC GAACGAAAAA AGATTGTTTC ATATTGCCGA AGCACTTAGA
AGAGGTTATA AGGTTTTTGA TATTCATAGA TTAACCTTCA TAGACGAATG GTTTTTAGAA
AAAATAAAAA ACATCGTCGA TTTTGAAAAT ACTATTAGAT TCTCCCAATT GAATTACGAC
CTATTACTTG AAGCAAAGGG TCTTGGCTTT TCAGACCAAG AAATATCTGA ATTAAACGGG
TTACAAGAAG ATCAAGTTAG AGAATTGAGA AAAACCTATG CTATTACTCC GTCATACAAA
ATGGTTGACA CATGTGCAGC GGAGTTTGAT TCAGTAACAC AATATCTCTA CTCAACTTAT
GGTGAAGAGG ACGAAATAGA GGTTCACAAG GACATAAAAA AAGTCATAGT TATAGGTGGA
GGACCGATAA GGATCGGACA AGGGGTGGAG TTTGATTATT GTACAGTTAA AGCTCTATGG
GCATTAAAAG AAAAATGTAT CAAATCAATC ATCATAAACA ACAATCCTGA AACCGTCAGT
ACAGATTTTG ATACAGGTGA TAGATTGTAC TTCGAACCCC TTACTCAAGA AGATGTTTTG
AATATCATAG AAAAAGAAGA TCCAATGGGG ACAATGGTCA TGTTTGGAGG GCAAACAGCT
TTAAATCTAG GTGAAGAACT TGAAAGACAT GGAATCAAAA TCTTGGGAAC ATCATATGAG
CATATTGATT TGTGTGAAGA TAGAAAAAGA TTTTCACTGT TGCTAAAAGA GTTGGAGATC
AATCAGCCTC GTGGTGGGTA CGTTACTTCA TTTGATGAAG CTAGAGAAAT TGCTAAGCGT
TTAGGGTTTC CTCTTTTAGT TAGACCCTCT TATGTGATTG GAGGACAATC TATTGAAAAG
GTTAATTCCG AAGATGAATT ATTCGAGTAC TTATCACATG CTTTAGACTT ATCACCCAAT
AGACCAGTTC TAATAGATGA ATACATAGAA GGAGTAGAAG TTGAAGTTGA TGCCGTCTCT
GATGGAGAAA ATGTATTAAT TCCTGGAATA ATGGAACATA TTGAAAAAGC GGGAATTCAT
TCAGGTGACA GTTTTGCCGT ATTTCCTGCC AAAACCTTGT CAGAATTAGA AGAGAAAGAA
ATTGTGAGAT ACGTTGAAAA AATATCCAAA GCGGTGAAAG TTAAGGGTTT AATAAACATT
CAATTTATCG TGAAAGAGGG AAAAGTTTAC GTTATTGAAG TGAATCCTAG GGCTTCAAGA
ACGGTTCCGA TAATCAGTAA AGTAACAGGA ATTCCAATGA TAAAACTGGC AGTTGAAATT
GCGTTAGGTA ATAACTTGAA AGAACTTGGG TATTATGAAC CTTTTTATCT AAAAATCCCA
TATACGGTGG TTAAAGCGCC AATATTTTCA TTAGAAAAAT TGCCAGGTGT TGAAGTTGCC
TTAGGTGCAG AGATGAAATC TACAGGGGAA ACTCTTGGCA TCGATTTCGA CTATCATAAT
GCGATGTATA AGGCTTTTAA AAGTGCTCAT TTGGATGTTC CTTCTACGGG TAATGTACTA
TTATCATTTC CAGAAAAAGA AGTGAGTGGA AGTAAAAGTT TTGTTAAATA TCTTCAAAGC
TGTGGATACG AATTGTGGGG AACTACTGGG ACAGCAGAAG CCTTCAAATT GATGGATATT
ACAATAAAAG AGATAGATCA CCAAAAATCA TTAGAGTTAG TAAAGAAAGG TTATTTTTCA
ATGGTTATTA ATTTACCTAC AAAAGGTAAA AACGTATCCA ACTTTGGATT CAAATTAAGA
AGAACGTCTT TAGAAAACGG CATTCCTCTA TTTACAGCAT TGGAAACAGC TCAAAAATCA
ATTGAAGCAA CAAAGAATTG CAAAATCGGA AAAAATAATG TACAGTCCTT GAACGAATAC
GTAGGTTATT ATCATAATCT ACAAAAAAAT TTTCAAATAT CAAAAAGAGG TGATTTATTT
ATGAAAACCG GGGAAAAGGT AGTATTGGCA TATTCAGGAG GGTTAGATAC ATCTGTAATC
ATACCATGGT TAAAAGAAAA GTATAATTGT GAAATTATTG CAGTATGTAT TGATGTAGGT
CAAGGAGAAG AAACACATGT TATCGAGAAA AAAGCTCTTT CAAGTGGTGC AAGTAAGGTT
TACGTAGAAG ATGTTGTGGA AGAATTTGTA ACCGATTATA TTTTTCCCAC CTTAAAAGCT
GGAGCAATCT ACGAGGGTAA ATACTTGTTG GGAACATCCT TTGCAAGACC TCTAATGGCA
AAAAAACTAG TTGAGATTGC CCAAAAAGAA GGTGCAAATG TTATTGCTCA TGGTTGTACG
GGTAAAGGTA ACGATCAAGT AAGATTTGAA GTATCTATTA AGGCATTAGA TCCTTCTATA
AAAATTATTG CTCCTTGGAG AATATGGGAA ATTAAGTCTA GGGAGGAAGA AATTGCCTAT
GCCCAAAAGA AGGGAATTCC AATATCTATA ACCAAAGAAA AAATATACAG TGTAGATAAA
AATATATGGC ATATAAGCCA TGAAGGCGGA GATTTAGAGG ATCCTTGGAA TGAACCTAAA
GCTGAGTTAT TCGATATGGT TACTCCACCC GAAAAAGCAC CCGATGTTGC TGAATATGTA
ACCATAGAAT TTGAAAAAGG GATTCCAGTG AAGATAAACG AAGAAGACCT TTCTCCCGTA
GAGTTGATAA AGAAAGCCAA TGAAATTGCA TCAATAAATG GTGTGGGGAT TGCAGATATC
GTAGAAAATC GATTAGTTGG AATGAAATCA AGAGGTGTGT ATGAAACTCC AGGTGGAACA
TTACTATATA CTGCACACAA AGAACTGGAA AGCTTGGTAC TTGACAAAGA AACGTCAAGA
TTCAAAGATT TAGTGGCACA AAAGTATGCG GATCTTGTTT ATAATGGATT GTGGTTCTCT
CAGTTGAAGG AGAGTTTAGA TGCTTTTGTA GATGAAACAC AGAAGGTGGT TACCGGTGTT
GTGAAATTGA AACTTTACAA GGGAAATATT ATAACTGCAG GATTAAGTTC ACCATATTCC
TTATACAACG AAGAGTTAGC TACATTTGGA GAAGATAAAA TTTACGACCA AAAGGATGCA
GAAGGTTTTA TAAACTTGTT TGGACTACCT TTGAAGATGA GAGCTTATCA GATGAAGCAT
TTTGTTGAAA ATCAAAAATA CGACAAAACG ACTGTAGGAG GAGAACAATG A
|
|---|
| Protein sequence | MPKKREIKNV LVIGSGPIII GQAAEFDYSG TQACKSLKEE GCKVILVNNN PATIMTDTEI
ADVVYMENLE MDTLISIIEK EKPDGILGTL GGQTALNLII QLKDSGIIDK YDIQELGTSV
ESIKIAESRE LFKRKMQEIE EPIAESLTVS TVSEAINFAN KVGYPLIIRP AYTLGGTGGG
FAYNEEELIE FVENGLKKSM MKEVLIERSL LGWKEIEYEL VRDSFDNCIT VCNMENFDPV
GIHTGDSIVV APSQTLTDQE HQMLRDSSIK IIKALKIEGA CNIQFALNPY NEEYRVIEVN
PRLSRSSALA SKATGYPIAK IATKIAIGFS LDEIKNPVTG KTTAFFEPSL DYVVTKIPRW
PFDKFYQADK KIGTQMKSTG ETMAIGRTFE SSLLKAVRSL DMKIKGLRIK EVQKESDEEL
VEHLQIPNEK RLFHIAEALR RGYKVFDIHR LTFIDEWFLE KIKNIVDFEN TIRFSQLNYD
LLLEAKGLGF SDQEISELNG LQEDQVRELR KTYAITPSYK MVDTCAAEFD SVTQYLYSTY
GEEDEIEVHK DIKKVIVIGG GPIRIGQGVE FDYCTVKALW ALKEKCIKSI IINNNPETVS
TDFDTGDRLY FEPLTQEDVL NIIEKEDPMG TMVMFGGQTA LNLGEELERH GIKILGTSYE
HIDLCEDRKR FSLLLKELEI NQPRGGYVTS FDEAREIAKR LGFPLLVRPS YVIGGQSIEK
VNSEDELFEY LSHALDLSPN RPVLIDEYIE GVEVEVDAVS DGENVLIPGI MEHIEKAGIH
SGDSFAVFPA KTLSELEEKE IVRYVEKISK AVKVKGLINI QFIVKEGKVY VIEVNPRASR
TVPIISKVTG IPMIKLAVEI ALGNNLKELG YYEPFYLKIP YTVVKAPIFS LEKLPGVEVA
LGAEMKSTGE TLGIDFDYHN AMYKAFKSAH LDVPSTGNVL LSFPEKEVSG SKSFVKYLQS
CGYELWGTTG TAEAFKLMDI TIKEIDHQKS LELVKKGYFS MVINLPTKGK NVSNFGFKLR
RTSLENGIPL FTALETAQKS IEATKNCKIG KNNVQSLNEY VGYYHNLQKN FQISKRGDLF
MKTGEKVVLA YSGGLDTSVI IPWLKEKYNC EIIAVCIDVG QGEETHVIEK KALSSGASKV
YVEDVVEEFV TDYIFPTLKA GAIYEGKYLL GTSFARPLMA KKLVEIAQKE GANVIAHGCT
GKGNDQVRFE VSIKALDPSI KIIAPWRIWE IKSREEEIAY AQKKGIPISI TKEKIYSVDK
NIWHISHEGG DLEDPWNEPK AELFDMVTPP EKAPDVAEYV TIEFEKGIPV KINEEDLSPV
ELIKKANEIA SINGVGIADI VENRLVGMKS RGVYETPGGT LLYTAHKELE SLVLDKETSR
FKDLVAQKYA DLVYNGLWFS QLKESLDAFV DETQKVVTGV VKLKLYKGNI ITAGLSSPYS
LYNEELATFG EDKIYDQKDA EGFINLFGLP LKMRAYQMKH FVENQKYDKT TVGGEQ
|
|---|
| |