Gene Pmob_1576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1576 
Symbol 
ID5757830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp1717513 
End bp1718550 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content36% 
IMG OID641302767 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001568595 
Protein GI160903014 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.242543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACAACAT ACATCATCAG AAGGTTGTTA TTACTACCTT TGATTATGTT AGGTGTTACT 
TTGATAGTTT TTTCTATGCA ACAATTACTA GGACCTTTGA AACTTTTATC TACCTATGTT
GATCCAAATA CTTATGCAAA ATTATCCGAT CAAGATAAAA TCGTTTTAAT GGAGCAGTAC
GGTTTAACAG ATCCTTGGCC AGTTAGATAC GGCAAATGGA TAGGGAATTT GTTCAAGGGT
GATCTTGGTT GGTCTGTAGT GGGGAAAGAA CCTGTTTTAG ATGCTTTATT ACACAGGTTC
CCCTATACGG TAGAATTAGC ACTATACGCT ATTTTTCCTA TAATAGGGAT TGGTATATGG
TTGGGGGTTA CCGCTGCAGT TCATCATAAC TCATTTATAG ATCAGGCTAT TAGAATATTT
GCTTTAATAG GTTGGTCTTT GCCAGATTTT GTTTGGGCAA TACTGGTCTT ATTGATATTT
TATATAGGTT TGGGATGGTT TCCACCAGGT AATCTGAGCT TATGGGCAGA CGAAGTTGTA
AAAAGTGCTA CCTTTAATAA TTATACTAAT CTTTTGACTA TAGATGCATT ACTCAACGGA
AGAATCGATA TATTTTGGGA TGCTTTAAGG CATATTTTAG GACCCATTAT TGCCATTTCT
TGGTTATGGT GGGCTAATCT ATTGAGAATT ACCCGATCTT CGATGTTGGA AGTTCTTAGA
AGAGATTATA TAAGAACTGC AAGATCAAAA GGTTTACCAG AAAGAGTAGT CATAAACAAA
CATGCCCGAA GAAATGCTCT AATTCCAGTT GTAACAACCG CAGGTCAAAT GGTTATTGGT
TTATTGGCAG GCGTTGTTAT AGTAGAGATG GTTTTTGTTA GAACAGGTTT GGGATCATTT
GCGGCAACAG CGGCTCAGAC TCTAGATTAT GCTTCTATAA TGGGTGTTTT ATTATTTACT
TCTTTCATAC TTATTGTTGG AAATCTTATA ATCGATATAT CGTATGCATT TATTGATCCA
AGAATCAGGT TAGGGTGA
 
Protein sequence
MTTYIIRRLL LLPLIMLGVT LIVFSMQQLL GPLKLLSTYV DPNTYAKLSD QDKIVLMEQY 
GLTDPWPVRY GKWIGNLFKG DLGWSVVGKE PVLDALLHRF PYTVELALYA IFPIIGIGIW
LGVTAAVHHN SFIDQAIRIF ALIGWSLPDF VWAILVLLIF YIGLGWFPPG NLSLWADEVV
KSATFNNYTN LLTIDALLNG RIDIFWDALR HILGPIIAIS WLWWANLLRI TRSSMLEVLR
RDYIRTARSK GLPERVVINK HARRNALIPV VTTAGQMVIG LLAGVVIVEM VFVRTGLGSF
AATAAQTLDY ASIMGVLLFT SFILIVGNLI IDISYAFIDP RIRLG