Gene Pmob_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1388 
Symbol 
ID5758024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand- 
Start bp1494504 
End bp1495136 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content34% 
IMG OID641302581 
Productendonuclease III 
Protein accessionYP_001568415 
Protein GI160902834 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.212617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAGAG ATATAAAAAA AGAAGCAGAA AAGATCATAA ATATGTTTCC ACGTAGTAAC 
TCTGAAACGG ATCCTTTTAA GGTTTTAATT GAAACGGTGC TTTCTCAAAG AACAAAAGAT 
GAAAATACTG AAAAAGCTTC TAAATCACTT TTTTCTTGCT ACACAAATGT TTTTGAGATT 
TCTAAATTGA ATCCGCAGGA CCTATACGAT CTAATCAAGC CAGCAGGTAT GTACAAACAA 
AAATCAGAAA GAATTATTAA TATTTCTAAA ATTTTAATTG AAAAGTATAA TGGGAAAGTA 
CCTGATGAAT TAGAAGAGTT GATTGAGCTT CCTGGAGTGG GAAGAAAAAC CGCTAATATA 
GTTTTGTACG TGTCTTTTGG TAAAGAAGCA CTTGCAGTTG ACACGCACGT ACATAGAATA 
TCTAATAGAC TCGGTTGGGT GAAAACAAAG ACACCTGAAG AAACTGAAGA ACAATTGAAA 
AAAATTATCC CGTCTGAATT GTGGGGACCT CTGAATGGTT CAATGGTGAA TTTTGGTCAA 
AAGATTTGTA AGCCAATTTC TCCAAAGTGC GACGAATGTT TTTTGAATGA AGTCTGCCCT 
GCAAAACAAA TATATAAAAA CAAAAGCCGG TAA
 
Protein sequence
MQRDIKKEAE KIINMFPRSN SETDPFKVLI ETVLSQRTKD ENTEKASKSL FSCYTNVFEI 
SKLNPQDLYD LIKPAGMYKQ KSERIINISK ILIEKYNGKV PDELEELIEL PGVGRKTANI 
VLYVSFGKEA LAVDTHVHRI SNRLGWVKTK TPEETEEQLK KIIPSELWGP LNGSMVNFGQ 
KICKPISPKC DECFLNEVCP AKQIYKNKSR