Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmob_1316 |
Symbol | |
ID | 5757695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Petrotoga mobilis SJ95 |
Kingdom | Bacteria |
Replicon accession | NC_010003 |
Strand | - |
Start bp | 1405056 |
End bp | 1407242 |
Gene Length | 2187 bp |
Protein Length | 728 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641302510 |
Product | 1,4-alpha-glucan branching enzyme |
Protein accession | YP_001568344 |
Protein GI | 160902763 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAATAC TAACGGAAAA AGAAATAAAT ATGCTTGTTA ATGCCGAATG TCACGACCCC TTTATCTATC TAGGCTTAAG AGAACTCGAT AAAGAAAACT TAGTCATAAG GGTTCTACAA CCCTTTGCAA AAGAAGCATA TTTGATTTCT AAAAACACCA CTATAAAACT CGATAAAATC CACAAAACTG GACTCTTTGA AAAAAAGATT CCAGGTTCAC AAATATTTGA ATACGAAATA AAATGCACAG ACTACAACGC CAACACCTGG ACTTACAAAG ACCCCTACTC TTTTTTACCA GTCATATCTG AATACGACAG ATATCTCTTC AATGAAGGGA ACCATTACAA AATATACGAA AAACTAGGCG CGCACCCCAT GAAAATAAAC GGAATCGAAG GGGTTTTATT CTCAACGTGG GCACCAAACG CTAAAAGAGT CAGCGTGGTT GGAAATTTCA ACAATTGGGA TGGAAGAATT CATCAAATGA GGGTCTTAGG TCAATCAGGA ATATGGGAAA TCTTCGTTCC CGGTGTTGTT GAAGGAGACT TATACAAATT TGAAATCAAA ACTCAAAATG GAGACATCTT GCTAAAAACA GACCCTTACG GAACTTACTT TGAAGTAAGG CCCAAAACAG CCGCCATTGT ATACGACAAA CAAAACAAAC ACACGTGGAA CGACTCCAAA TGGATGGAGG AAAGAAAAAA TAAAAATTGG ATAAAAGAAC CGATGTCTAT CTATGAAGTC CATCTAGGCT CCTGGGCAAG AAAAGAAGAA AATCAATTTC TAAATTATAG GGAACTAGCG GAAAAACTTT CAGCATACCT TAAAGAAAAC CATTTTACTC ACATAGAACT ATTACCGGTA AGCGAACACC CCTTAGACAT CTCTTGGGGA TACCAGGTAA CAGGTTACTA TGCTCCAACA AGCAGGTTTG GAAAACCGGA AGATTTCATG TACTTTGTAG ATAAAATGCA TCAAGAAGGT ATAGGCGTCA TCGTTGATTG GGTGCCTGGA CACTTCCCAA AAGACGCACA TGCTTTGGGA AGATTCGATG GCACAGCCCT TTACGAACAC CTCGACAGCA GATTGGGAGA ACACAAAGAC TGGGGAACTT ACATATTCAA TTACGGAAGA ACCGAAGTTA AAAACTTTCT ATTGGCAAAC GCACTATTTT GGTTGGATAA ATACCACATC GACGGCTTAA GGGTAGACGC TGTAGCTTCA ATGCTATACT TAGACTACAG CAGACAAGAT GGAGAATGGA TTCCCAACAA ATACGGTGGG CGAGAAAATC TCGAAGCCAT TGATTTCATC AAACAACTCA ACACCGTCGC CTATCAATAC TTCCCTGGGA TTGTAACCGT TGCAGAAGAA TCTACGGCGT TTCCAGGAGT AACTACGCCG GTACACGAGG GCGGTTTAGG CTTTGAATTC AAATGGAATA TGGGTTGGAT GAACGACACA TTAAGATACT TTAGCAAAGA CCCAATATTT AGAAGATACC ATCAAAACGA CCTCACATTT TCCCTAGTAT ACGCTTTTTC CGAAAACTTT ATCTTATCCA TTTCTCATGA CGAAGTCGTA CATGGCAAAA GGTCCCTTTT GGAAAAAATG CCAGGTGATG ATTGGCAAAA ATTCGCCAAC TTAAGGCTCT TTTACTCCTA CATGTATGCC CATCCTGGCA AAAATTTACT CTTTATGGGA AGTGAAATAG CCCAAAGAAA AGAATGGGAC TGCTCTAACA GTTTAGACTG GCACCTATTA CAATACGAAC CTCACAAAAA AACACAACTA TTTTTAAAAG ACTTAAATAT ACTGTACAAA AATCATCCCG CATTATTTGA AATTGATCAC CGTTATGAAG GCTTCGAATG GATAGACTTC AACGATGCGG ACAACAGTGT AATATCTTTT ATAAGAAAAT CAGAAAATGA AGATGAAATT ATCGTCTGCG TCTTCAATTT CACACCAGTG CCAAGGGATA ACTATAGAAT AGGCGTACCA AAAAAAGGCG TATACCAAGA AATACTCAAC ACAGACTGGA CACAATACTA CGGAAGTGGA GTCGACAATC CAAAAGAAGT ATACTCTCAA GACATACCCA TGCATGGAAG AGAACAATCC ATAATACTCA CACTACCACC TCTAGGTGGT CTATATTTCA AATTCCTAAT AAAATAA
|
Protein sequence | MPILTEKEIN MLVNAECHDP FIYLGLRELD KENLVIRVLQ PFAKEAYLIS KNTTIKLDKI HKTGLFEKKI PGSQIFEYEI KCTDYNANTW TYKDPYSFLP VISEYDRYLF NEGNHYKIYE KLGAHPMKIN GIEGVLFSTW APNAKRVSVV GNFNNWDGRI HQMRVLGQSG IWEIFVPGVV EGDLYKFEIK TQNGDILLKT DPYGTYFEVR PKTAAIVYDK QNKHTWNDSK WMEERKNKNW IKEPMSIYEV HLGSWARKEE NQFLNYRELA EKLSAYLKEN HFTHIELLPV SEHPLDISWG YQVTGYYAPT SRFGKPEDFM YFVDKMHQEG IGVIVDWVPG HFPKDAHALG RFDGTALYEH LDSRLGEHKD WGTYIFNYGR TEVKNFLLAN ALFWLDKYHI DGLRVDAVAS MLYLDYSRQD GEWIPNKYGG RENLEAIDFI KQLNTVAYQY FPGIVTVAEE STAFPGVTTP VHEGGLGFEF KWNMGWMNDT LRYFSKDPIF RRYHQNDLTF SLVYAFSENF ILSISHDEVV HGKRSLLEKM PGDDWQKFAN LRLFYSYMYA HPGKNLLFMG SEIAQRKEWD CSNSLDWHLL QYEPHKKTQL FLKDLNILYK NHPALFEIDH RYEGFEWIDF NDADNSVISF IRKSENEDEI IVCVFNFTPV PRDNYRIGVP KKGVYQEILN TDWTQYYGSG VDNPKEVYSQ DIPMHGREQS IILTLPPLGG LYFKFLIK
|
| |