Gene Pmob_1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1316 
Symbol 
ID5757695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp1405056 
End bp1407242 
Gene Length2187 bp 
Protein Length728 aa 
Translation table11 
GC content39% 
IMG OID641302510 
Product1,4-alpha-glucan branching enzyme 
Protein accessionYP_001568344 
Protein GI160902763 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0296] 1,4-alpha-glucan branching enzyme 
TIGRFAM ID[TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAATAC TAACGGAAAA AGAAATAAAT ATGCTTGTTA ATGCCGAATG TCACGACCCC 
TTTATCTATC TAGGCTTAAG AGAACTCGAT AAAGAAAACT TAGTCATAAG GGTTCTACAA
CCCTTTGCAA AAGAAGCATA TTTGATTTCT AAAAACACCA CTATAAAACT CGATAAAATC
CACAAAACTG GACTCTTTGA AAAAAAGATT CCAGGTTCAC AAATATTTGA ATACGAAATA
AAATGCACAG ACTACAACGC CAACACCTGG ACTTACAAAG ACCCCTACTC TTTTTTACCA
GTCATATCTG AATACGACAG ATATCTCTTC AATGAAGGGA ACCATTACAA AATATACGAA
AAACTAGGCG CGCACCCCAT GAAAATAAAC GGAATCGAAG GGGTTTTATT CTCAACGTGG
GCACCAAACG CTAAAAGAGT CAGCGTGGTT GGAAATTTCA ACAATTGGGA TGGAAGAATT
CATCAAATGA GGGTCTTAGG TCAATCAGGA ATATGGGAAA TCTTCGTTCC CGGTGTTGTT
GAAGGAGACT TATACAAATT TGAAATCAAA ACTCAAAATG GAGACATCTT GCTAAAAACA
GACCCTTACG GAACTTACTT TGAAGTAAGG CCCAAAACAG CCGCCATTGT ATACGACAAA
CAAAACAAAC ACACGTGGAA CGACTCCAAA TGGATGGAGG AAAGAAAAAA TAAAAATTGG
ATAAAAGAAC CGATGTCTAT CTATGAAGTC CATCTAGGCT CCTGGGCAAG AAAAGAAGAA
AATCAATTTC TAAATTATAG GGAACTAGCG GAAAAACTTT CAGCATACCT TAAAGAAAAC
CATTTTACTC ACATAGAACT ATTACCGGTA AGCGAACACC CCTTAGACAT CTCTTGGGGA
TACCAGGTAA CAGGTTACTA TGCTCCAACA AGCAGGTTTG GAAAACCGGA AGATTTCATG
TACTTTGTAG ATAAAATGCA TCAAGAAGGT ATAGGCGTCA TCGTTGATTG GGTGCCTGGA
CACTTCCCAA AAGACGCACA TGCTTTGGGA AGATTCGATG GCACAGCCCT TTACGAACAC
CTCGACAGCA GATTGGGAGA ACACAAAGAC TGGGGAACTT ACATATTCAA TTACGGAAGA
ACCGAAGTTA AAAACTTTCT ATTGGCAAAC GCACTATTTT GGTTGGATAA ATACCACATC
GACGGCTTAA GGGTAGACGC TGTAGCTTCA ATGCTATACT TAGACTACAG CAGACAAGAT
GGAGAATGGA TTCCCAACAA ATACGGTGGG CGAGAAAATC TCGAAGCCAT TGATTTCATC
AAACAACTCA ACACCGTCGC CTATCAATAC TTCCCTGGGA TTGTAACCGT TGCAGAAGAA
TCTACGGCGT TTCCAGGAGT AACTACGCCG GTACACGAGG GCGGTTTAGG CTTTGAATTC
AAATGGAATA TGGGTTGGAT GAACGACACA TTAAGATACT TTAGCAAAGA CCCAATATTT
AGAAGATACC ATCAAAACGA CCTCACATTT TCCCTAGTAT ACGCTTTTTC CGAAAACTTT
ATCTTATCCA TTTCTCATGA CGAAGTCGTA CATGGCAAAA GGTCCCTTTT GGAAAAAATG
CCAGGTGATG ATTGGCAAAA ATTCGCCAAC TTAAGGCTCT TTTACTCCTA CATGTATGCC
CATCCTGGCA AAAATTTACT CTTTATGGGA AGTGAAATAG CCCAAAGAAA AGAATGGGAC
TGCTCTAACA GTTTAGACTG GCACCTATTA CAATACGAAC CTCACAAAAA AACACAACTA
TTTTTAAAAG ACTTAAATAT ACTGTACAAA AATCATCCCG CATTATTTGA AATTGATCAC
CGTTATGAAG GCTTCGAATG GATAGACTTC AACGATGCGG ACAACAGTGT AATATCTTTT
ATAAGAAAAT CAGAAAATGA AGATGAAATT ATCGTCTGCG TCTTCAATTT CACACCAGTG
CCAAGGGATA ACTATAGAAT AGGCGTACCA AAAAAAGGCG TATACCAAGA AATACTCAAC
ACAGACTGGA CACAATACTA CGGAAGTGGA GTCGACAATC CAAAAGAAGT ATACTCTCAA
GACATACCCA TGCATGGAAG AGAACAATCC ATAATACTCA CACTACCACC TCTAGGTGGT
CTATATTTCA AATTCCTAAT AAAATAA
 
Protein sequence
MPILTEKEIN MLVNAECHDP FIYLGLRELD KENLVIRVLQ PFAKEAYLIS KNTTIKLDKI 
HKTGLFEKKI PGSQIFEYEI KCTDYNANTW TYKDPYSFLP VISEYDRYLF NEGNHYKIYE
KLGAHPMKIN GIEGVLFSTW APNAKRVSVV GNFNNWDGRI HQMRVLGQSG IWEIFVPGVV
EGDLYKFEIK TQNGDILLKT DPYGTYFEVR PKTAAIVYDK QNKHTWNDSK WMEERKNKNW
IKEPMSIYEV HLGSWARKEE NQFLNYRELA EKLSAYLKEN HFTHIELLPV SEHPLDISWG
YQVTGYYAPT SRFGKPEDFM YFVDKMHQEG IGVIVDWVPG HFPKDAHALG RFDGTALYEH
LDSRLGEHKD WGTYIFNYGR TEVKNFLLAN ALFWLDKYHI DGLRVDAVAS MLYLDYSRQD
GEWIPNKYGG RENLEAIDFI KQLNTVAYQY FPGIVTVAEE STAFPGVTTP VHEGGLGFEF
KWNMGWMNDT LRYFSKDPIF RRYHQNDLTF SLVYAFSENF ILSISHDEVV HGKRSLLEKM
PGDDWQKFAN LRLFYSYMYA HPGKNLLFMG SEIAQRKEWD CSNSLDWHLL QYEPHKKTQL
FLKDLNILYK NHPALFEIDH RYEGFEWIDF NDADNSVISF IRKSENEDEI IVCVFNFTPV
PRDNYRIGVP KKGVYQEILN TDWTQYYGSG VDNPKEVYSQ DIPMHGREQS IILTLPPLGG
LYFKFLIK