Gene Pmob_1225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1225 
Symbol 
ID5757044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp1308758 
End bp1309999 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content36% 
IMG OID641302429 
ProductOrn/DAP/Arg decarboxylase 2 
Protein accessionYP_001568264 
Protein GI160902683 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID[TIGR01048] diaminopimelate decarboxylase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGGGTT TGAAAAAAGA ACTTCCCTTT TCAGAGAAAG AGTTAAATAA TCTATTAAAG 
AGCGTACAAA CACCTTTTTA TCTCTACGAT GAAAAAGGTA TAAGAAATAG AATAAAAACA
TTAAAAGATG CCTTTTCTTG GGCTGATTTC AAAGAGTTTT TCGCCGTGAA GGCAACCCCT
AATCCCAACA TATTAAAGAT TACAAAAGAA GAAGGTTGTG GAGTAGATTG CAGCTCAATG
GCAGAACTGG TGGCAGCAGA AAAAAGTGGA TTTGTGAATA ACGAGATCCT ATTTACATCC
AACGATACCC CTTTGCAAGA GTATGAAAAG GCTTTATCTT TAAACGCCAT TTTGAATCTT
GACGATGTAA GCCATATAGA TTTATTAAAA GAAAAATATA AGTTGCCTGA TTTGGTGTCC
ATCAGATACA ATCCAGGCGG GGATTTTGGA AACGAGATAA TAGGGAATTT AAAGGAATCA
AAATTCGGAG TACCTAAAAA GGATCTAATA AACGGATTCG CAAGGCTCAA AGATTATGGG
GTTAAAAGAT TCGGACTGCA TGCGATGTTG ATTTCAAATG AATTGAATCC TCAAAATATA
ATAAAAGTCG CCCAATTTCT TTTTGAAACC GCTGTGGAAG TGAATAAAAA ATTGGTGATA
GATTTTGAAT TTATAAATCT CGGCGGCGGT TTTGGTATAC CTTATAAACC CGAAGAAACG
GAACTTGATA TATACTACAT CTCACGCCAA ATAAAAAAAT TGTATGAGAA TGTTTTACTG
GAAAATGGAC TAAAACCTCC AAAGATATAT ATGGAGCACG GAAGATACAT CACTGGACCT
AATGGCTACT TAATAACAAA AGTCTTGCAT ATAAAAGAGT CCTACAAAAA ATACGCTGGA
ATTGACGCTA ACTCTGCAAA TTTACTGAGA CCCGCTATGT ACAAGGCTTA TCATCATATA
ACGGTATTAA ATAAAAATTC CGATGAAAAA ACAGAGTTGT ACGATGTGGT AGGATCGTTA
TGCGAAAATA ACGACAAACT CGCAACAGAT CGATTATTAC CAGAGTTGAA ACGTGGAGAC
GTCTTAGTTT TTCATGATGT CGGTGCACAT GGATACTCCA TGGGATATAA CTATAATGGA
AAATTAAGAT CCGCTGAGTA TTTGTTCACC AAAGATAGAG CATTCAAAAT GATAAGACGA
GCCGAAACGT TGGATGATTA CTTTGCAACC TTCGATTTTT AA
 
Protein sequence
MRGLKKELPF SEKELNNLLK SVQTPFYLYD EKGIRNRIKT LKDAFSWADF KEFFAVKATP 
NPNILKITKE EGCGVDCSSM AELVAAEKSG FVNNEILFTS NDTPLQEYEK ALSLNAILNL
DDVSHIDLLK EKYKLPDLVS IRYNPGGDFG NEIIGNLKES KFGVPKKDLI NGFARLKDYG
VKRFGLHAML ISNELNPQNI IKVAQFLFET AVEVNKKLVI DFEFINLGGG FGIPYKPEET
ELDIYYISRQ IKKLYENVLL ENGLKPPKIY MEHGRYITGP NGYLITKVLH IKESYKKYAG
IDANSANLLR PAMYKAYHHI TVLNKNSDEK TELYDVVGSL CENNDKLATD RLLPELKRGD
VLVFHDVGAH GYSMGYNYNG KLRSAEYLFT KDRAFKMIRR AETLDDYFAT FDF