Gene Pmob_1173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1173 
Symbol 
ID5756579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand+ 
Start bp1257910 
End bp1258575 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content35% 
IMG OID641302379 
Productdeoxyribonuclease V 
Protein accessionYP_001568214 
Protein GI160902633 
COG category[L] Replication, recombination and repair 
COG ID[COG1515] Deoxyinosine 3'endonuclease (endonuclease V) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATATA AACCTGTTCA TCGGTTCGAT ATGTCTCCTA AAGATATGAT AAAAGTGCAA 
AAACAATTAG CTAAAGAGGT AAAATTAATC CATTTTTCGG ATGAACCAAA CTTAGTAAGC 
GGTGTTGATC TTTCCTTTCC AAAAGACGAA GGATTAGCTG TAATTGTAAC AATGGATTTT 
AAAAAATTAT CGGTGATCGA TGTAACATAT GCCGTGGATA AGATTACCTT ACCATATATA 
CCTGGCCTTC TTGCTTTTAG AGAGCTTCCT ATCTTTTTAA AGGCTTGGGA AAAACTTGAA 
ATTGAACCTG ATATAGTTTT TTTTGATGGT CAAGGCTATG CCCATCCTAG AAGGATGGGC 
ATAGCTACAC ATGCGTCTTT TTTTATTGAA AAGCCTACTA TAGGAATTGC TAAATCTAAG 
TTAATTGGTG AATACGAAGA ACCCGGAAAG AAAAAAGGTG AATTCACATT TCTGTACCAT 
AAAGATGAGA AAATAGGAAT AGTGTTGAGA ACAAGAGACA ATGTGAAACC TGTATTTGTA 
TCTCCTGGCA ACTTGGTTGA TTTCAATAAC GCTTTAGATT TCACTTATCA TTTCGCCACA 
AAGTATAAAA TTCCAGAGAT AACTCGAAAG GCACACTTAT ACACTCAAAG TTTAAAGCAG 
AGGTGA
 
Protein sequence
MKYKPVHRFD MSPKDMIKVQ KQLAKEVKLI HFSDEPNLVS GVDLSFPKDE GLAVIVTMDF 
KKLSVIDVTY AVDKITLPYI PGLLAFRELP IFLKAWEKLE IEPDIVFFDG QGYAHPRRMG 
IATHASFFIE KPTIGIAKSK LIGEYEEPGK KKGEFTFLYH KDEKIGIVLR TRDNVKPVFV 
SPGNLVDFNN ALDFTYHFAT KYKIPEITRK AHLYTQSLKQ R