Gene Pmob_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1115 
Symbol 
ID5757270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp1197065 
End bp1197973 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content33% 
IMG OID641302322 
Productprotein-export membrane protein SecF 
Protein accessionYP_001568157 
Protein GI160902576 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0341] Preprotein translocase subunit SecF 
TIGRFAM ID[TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAATA TAGATTTTGT TGGTAAGAGG AGTTTTTTCA TTTATTTATC AATTGCTTTG 
ATACTTTTTT CTGTAATAGT GATTTTTGTA AAAGGATTCA ATTTAGGTGT TGATTTTTCT
GGTGGTAGTG AAATCATCGT GTCTTTTGAT AAAAGTTATA CAATTGATGA ATTGAGAAAC
GGTTTACAAA CGATAAATCA AGAGTATGCT ACCGCTAAGA TCATTCAAAC TAACCCAGGT
GGAGGAGCTT CTGATCAATT CTTTTACATA ATTACCGTAA GAGATTCTTT CCCTACGTTG
GAAGAAAAAC AAATGTTCAT AAATAGTTTA GAAGAATCTT TTTCTGATTC GAGCTTAAAT
ATTGAACAAT TCAACGATGT TTCAGGTTAT GCTGCTAGGG AAATTCGATC GTATGCTTGG
TATGCTGTAA TTATTTCTCT GATAGTTTTG CTAGCTTATA TAACCATCAG GTTTCAATTT
TCCTACGGTG TGGGAGCGAT TTTAGCTTTA GCTCATGACG TTATAATCAC CTTAGGATTT
TATTCCCTCT TTGGTATAGA AATGAACTTA ACCGCAATAG CCGCATTTCT TACTTTAGCA
GGTTATTCCC TAAACGATAC TATCGTTGTT TATGATAGAA TAAGGGAAAA CAGATCTAAA
AATCGTGGGA TGGATATAGA AAGTATAACA AATAAAAGCA TTAACGAAGT TATTGTAAGG
TCATTGAACA CTTCCTTGAC AACATTCCTA GTTGTTTTTA TGATGTTCCT TTTGGGAGGT
AGGTCAATAG CTTCATTTGC TTTCGGATTA ACTGTGGGAG TTATAATTGG GACTTATTCT
TCGTTATATA TTGCGAGTCC AATTGTCATA GGTATGGTAA AAAGACGTAA GAAAACACAA
AAAGCTTAA
 
Protein sequence
MPNIDFVGKR SFFIYLSIAL ILFSVIVIFV KGFNLGVDFS GGSEIIVSFD KSYTIDELRN 
GLQTINQEYA TAKIIQTNPG GGASDQFFYI ITVRDSFPTL EEKQMFINSL EESFSDSSLN
IEQFNDVSGY AAREIRSYAW YAVIISLIVL LAYITIRFQF SYGVGAILAL AHDVIITLGF
YSLFGIEMNL TAIAAFLTLA GYSLNDTIVV YDRIRENRSK NRGMDIESIT NKSINEVIVR
SLNTSLTTFL VVFMMFLLGG RSIASFAFGL TVGVIIGTYS SLYIASPIVI GMVKRRKKTQ
KA