Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmob_1070 |
Symbol | |
ID | 5758115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Petrotoga mobilis SJ95 |
Kingdom | Bacteria |
Replicon accession | NC_010003 |
Strand | - |
Start bp | 1139276 |
End bp | 1142479 |
Gene Length | 3204 bp |
Protein Length | 1067 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641302276 |
Product | HsdR family type I site-specific deoxyribonuclease |
Protein accession | YP_001568112 |
Protein GI | 160902531 |
COG category | [V] Defense mechanisms |
COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.558069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCGCA GACTTGATGA AGAACATTAT GTAGAAAATC CTTTCCTCGC TCAGCTTCTG AGGTTGGGCT GGAAAGTTTA TAGACAGAAT AAGGATAACC CTGAAGATGT AAAAGAAATC AAATCTTTTA ACTCATCCTC TGAACCTGAC TATAGTGAAA GCATAAAATT CAGGGAAACA TTTGGAGAGG TAATTCTCGA AGAGGAACTC ATAAGTTCAA TCAAAAGAAT AAATCCATGG ATGGAAGAAG ACCAGATAAA TGAAGTTGTA AGAAGGATAA AAACGCCTTC AGCAAACTTT CTTCTGGAGG CGAACAAGGA AATTCACGAT TTGTTACTTG AAAATACTTC TGTATCAGAG AACAGGAAAA CAGGAGAAAA AAGTCCAACT GTCAGATTTA TAGATTTTAG AAACCCAGAA AATAACTCAT TTATTGCAAT TTCCCAGTTT AAGGTAAATA TACCAGGGAC TGAGAAGCAT ATAATACCCG ATATTGTTCT TTTTGTAAAT GGTTTGCCTT TGGTGGTCGT GGAATGTAAA TCTCCAGCCA TTGCAGACCC AATTACAGAG GCGATAACCC AGCTTAGGAG ATACTCCAAC AGAAGGGGAG AAAAAGAGGG GAATGAAAAA CTCTTCTGGT ATAATCTCTT TACGATTGCT ACATCTAATC AAACTGCAAA GTATGGTACT ATAACTGCAG AATATGAACA TTTTGTCGAA TGGAAAGATC CGTACCCTTA CACTCTATCA GACATAAATC CTGAGAGAAG TGTAACTAGT CAACAGGTTT TAGTTCAGGG AATGCTAGCA AAGGGCAACA TCTTAGATCT TCTCCATACG TTTACCATTT TCAAAGAGGA TTCTAAGGGC GGTGTTATAA AGGTTGTGGC AAGATACCAG CAGTTCAGAG CAGTTAAGAA GATCGTAAAA AAGATAAAAG AAGGGAAAAC CCCTGAAGAA AGAGGGGGAA TTATCTGGCA TACCCAGGGC TCTGGAAAAT CATTAACCAT GATGTTTACT GTTAGAGAAA TGTATCATAA CCCTGAATTT GGCAACTTCA AGGTTATTTT TATAACAGAC AGAAAAGATC TAGAAAGACA ATTAAAAGAA ACATCAAAAA GTGTTGGCTT TACGGTCCAT CCTGCTGGGA GTATAAAAGA GTTACAGAAC CTTTTAAAGA CTGACACTCC AGACCTTGTT ATGGGCATGA TTCACAAATT TCAAGAAAGA GAACTTAAAA TAGAATTTCC TCTGTTAAAT ACATCCCCGA ACATTCTTAT CATGATAGAC GAAGCACACA GAACACAATA CAAATTCCTG GGGGCCAATC TGAGAAAAGC CCTCCCAAAT GCTCTAAAAA TAGCCTTCAC AGGCACACCA ATTGAAAAAA CTGAAAAAAC TTTTGGTGAG TACATAGATA AATACAGTAT AAGACAAGCG GTTGATGATG GTGTAACCGT GGAAATCGTT TATGAAGGTA GATCACACAC CGCAGAACTT TCTGATGAAG AAGCTGCAAA TGCAAAGTTT GAGGATGTTT TCTCCATGAT TGATGCAGAT CAGAAAGCCA AGATTATGGG GAGATACACA TGGCAGGCTT ATCTTGAAGA TGAGAATGTG ATAATGGACA AGGCGAAGGA TATGATAAAT CACTACGTTG CCCATGTCTT TCCAAATGGA TTTAAGGCTC AGGTTGTAAC TGTTTCAAGG CTTGCTGCAA TAAGATATAA AAAAGCCCTT GAGAATGCAT TGAAGGAAAA AATAGAGGAA TTAAAAAAGA ATACTCTGAG TAAAATAGAT ATAAATCAGC TTGAGAAATT AAAAGTTGGC GTGGTTATTT CTGGATTGGC TAATGATCCT CCAGAGTACC AGCCTTACAC CGACACAAAC GAGCATGAAA AGATAATAAA GAGCTTCAAG TTTCCCTTTG ATAAAACTGA TGATGGAGGC ATTTCTGGTG ATGTTGGTAT TTTAGTTGTT CAGAGTATGC TTATTACTGG ATTTGATGCC CCTATTGAAC AGGTTATGTA TTTAGATAAT GTAATTAAAG AACACAACTT ATTACAAGCA ATTGCCAGAG TGAACAGAGT TTACAAAAAC AAGAGTTGTG GTTTTATTGT GGATTATGTT GGAGTTTTAA AGCATTTAAG AGAATCTCTT GCCATTTATG CCGATGAAGA TATTGAAGAG ATCACGCAAG TTGTTAAGGA TAAAGCCAAA AGCATTGATG ATTTAAAATT TATCCATAGC CTTATCGAAG ATTTTTTTAA AAAGTATGAG ATTGAAAACT GGAGAGATAA CATAGATGAA TGCATAGATC TTCTTGTTGA TGAAGAGGTG AGAAATGAAT TTATAATGCT TATAAGAAGC TTTAATAGCG CAATGGATGC TGTGCTTCCT GACCCAGATG CTCTAAAATA CGTCACGGAT CTAAAGATTC TCAATTTCAT AAAAGAGTCC GCAAGGAACA GGTATAGGGA CGACAAGTTA AGCATCAAGG ATGCAAGTAG AAAGATAAGG GAGATTGTTG AAGAGTATCT AATATCAAAA GGTGTTGATC CAAAAATACC ACCAACTCCT CTTCTTGAAG ATAAATTCAT CAATAAATTA GAAAAGAAAA AATCGAGCAA AGCGAGAGCT GAAGAACTTA GGTATGCCAT TGTAGAACAC ATTGAAAAGC ACTATGAAGA AGACCCTGAG TTTTACGAGA GGTTTTCTGA TAGGTTAAGG AGAATCCTTG AAGAATACAA AGATAACTGG GACAATCTTG CCATCGAGCT TAAAAAGTTT AGAGAAGCTA TAAAAAAAGG AAGAGAAGCA GAAGAGACCT TTGGTTTTGA ACCAAAAAAA GAGATGCCAT TTTTCGGACT GATAAAACAA GAAATATACG GTGTAAAACC TATCGAAACA CTGAGCGATA AAGATATTGA CTTTTTAGTT AGTTTAACCA AGGATGTGAT TGAAATCGTA AGAAGAGAGA GTCAAGTGGT TGACTTCTGG GAGAACTACA CCAGGCAAAA GATATTAAAA TCTTTTTTGA TATCCAGGTT ACTCTCTTCT TATTCCCAAT CCCGAAACGA AGAGTATGTG TTAAGGGAAA ATCCTGCTCC GTATTTAGCA GAGGAGAACA AAGTGATATT TGGAAAAAGA AATGAAATAG CCCAGAAGTT GATGGAACTT GCTTATCACA TTTATGGGAA GTGA
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Protein sequence | MYRRLDEEHY VENPFLAQLL RLGWKVYRQN KDNPEDVKEI KSFNSSSEPD YSESIKFRET FGEVILEEEL ISSIKRINPW MEEDQINEVV RRIKTPSANF LLEANKEIHD LLLENTSVSE NRKTGEKSPT VRFIDFRNPE NNSFIAISQF KVNIPGTEKH IIPDIVLFVN GLPLVVVECK SPAIADPITE AITQLRRYSN RRGEKEGNEK LFWYNLFTIA TSNQTAKYGT ITAEYEHFVE WKDPYPYTLS DINPERSVTS QQVLVQGMLA KGNILDLLHT FTIFKEDSKG GVIKVVARYQ QFRAVKKIVK KIKEGKTPEE RGGIIWHTQG SGKSLTMMFT VREMYHNPEF GNFKVIFITD RKDLERQLKE TSKSVGFTVH PAGSIKELQN LLKTDTPDLV MGMIHKFQER ELKIEFPLLN TSPNILIMID EAHRTQYKFL GANLRKALPN ALKIAFTGTP IEKTEKTFGE YIDKYSIRQA VDDGVTVEIV YEGRSHTAEL SDEEAANAKF EDVFSMIDAD QKAKIMGRYT WQAYLEDENV IMDKAKDMIN HYVAHVFPNG FKAQVVTVSR LAAIRYKKAL ENALKEKIEE LKKNTLSKID INQLEKLKVG VVISGLANDP PEYQPYTDTN EHEKIIKSFK FPFDKTDDGG ISGDVGILVV QSMLITGFDA PIEQVMYLDN VIKEHNLLQA IARVNRVYKN KSCGFIVDYV GVLKHLRESL AIYADEDIEE ITQVVKDKAK SIDDLKFIHS LIEDFFKKYE IENWRDNIDE CIDLLVDEEV RNEFIMLIRS FNSAMDAVLP DPDALKYVTD LKILNFIKES ARNRYRDDKL SIKDASRKIR EIVEEYLISK GVDPKIPPTP LLEDKFINKL EKKKSSKARA EELRYAIVEH IEKHYEEDPE FYERFSDRLR RILEEYKDNW DNLAIELKKF REAIKKGREA EETFGFEPKK EMPFFGLIKQ EIYGVKPIET LSDKDIDFLV SLTKDVIEIV RRESQVVDFW ENYTRQKILK SFLISRLLSS YSQSRNEEYV LRENPAPYLA EENKVIFGKR NEIAQKLMEL AYHIYGK
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