Gene Pmob_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1005 
Symbol 
ID5757958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp1074620 
End bp1075237 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content35% 
IMG OID641302214 
ProductATP-dependent Clp protease, proteolytic subunit ClpP 
Protein accessionYP_001568050 
Protein GI160902469 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATAC CTATGCCGGT AGTTATAGAA ACTGAAGGAA GATACGAAAG GGCTTATGAT 
ATCTATTCTA GATTGTTGAA AGATAGAATA GTTTTTTTAG GGACACCCAT AAACGATGAT
GTGGCTAATG TAATAATTGC CCAATTACTC TTCCTAGAAT CTCAGGATCC AGACAAAGAT
ATATTTTTAT ACATAAACTC TCCAGGAGGT TCTGTAACCT CAGGATTAGG AATATACGAT
ACGATGCAGT ACGTAAAGCC AGATATTTCA ACTATATGTA TAGGTCAGGC TGCCTCAATG
GGAGCGGTAT TATTGGCTGC TGGTGCAAAA GGTAAAAGGT ATTCTTTACC TTATTCAAGA
ATAATGATAC ATCAACCTTG GGGTGGCGCC GAAGGAACAG CGATCGATAT ACAAATACAC
GCTAGAGAAA TTTTAAGATT AAAAGATGAT CTAAACAACA TACTTAGCAA ACATACTGGA
CAATCTTTAG AAAAAATAGA AAAAGATACC GAGAGAGACT TTTTTATGAA TGCACAAGAA
GCTTTAAACT ATGGTCTCAT AGATAAAGTA ATAACAACCA AGAGTGAAGC AACCGCTAAA
GAAAACAACG AAAAATAA
 
Protein sequence
MSIPMPVVIE TEGRYERAYD IYSRLLKDRI VFLGTPINDD VANVIIAQLL FLESQDPDKD 
IFLYINSPGG SVTSGLGIYD TMQYVKPDIS TICIGQAASM GAVLLAAGAK GKRYSLPYSR
IMIHQPWGGA EGTAIDIQIH AREILRLKDD LNNILSKHTG QSLEKIEKDT ERDFFMNAQE
ALNYGLIDKV ITTKSEATAK ENNEK