Gene Pmob_0873 details

Gene Information

• Locus tag: Pmob_0873
• ID: 5757110
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Petrotoga mobilis SJ95
• Kingdom: Bacteria
• Replicon accession: NC_010003
• Strand: +
• Start bp: 927191
• End bp: 929128
• Gene Length: 1938 bp
• Protein Length: 645 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 641302082
• Product: ATP-dependent metalloprotease FtsH
• Protein accession: YP_001567919
• Protein GI: 160902338
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0168176
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCAAAATA AAAGAAACCA ATCTAGAGTT CTTTGGCTAT TATTAATATA TATAACAATA 
GGTATTTTTA TATATGTTGG AGTTAACAGC CTTATCGGTA CTCCAGATGT TTCGAAAATA 
GAATATAGTG AGTTAGTTCA AATGTTGGAA GATAAAAAGA TTGTCTCTCT AGAAATAGAA 
GATTCTGGCT ATGCCAGAGC AAGAGATAAT AGAGGACTTT ATTATGAAAC ATATGCCCCA 
ACTCTTTTAT CAGACCAACA ATATGTTTAT GGACTTGCAA ATCAAGGAAT AGAGATTAAA 
TATGTCAGAA GCTTAGAAAA CAGTTGGTGG ATCTCTATTT TAACGTTTCT TTTGCCTGTT 
TTCTTACTTA TTTTTCTTTT CACCTTTTTG TTTCGATCAA GCGGGGGTGG AGCAAATCAA 
GGTATGAATT TTATAAAAAG TCCTGCTAAA AAATATGACC CCAAAAAAAC CCGCACCACT 
TTTAATGACG TTGCAGGGGT TAAGGAAGCG AAAGAAGAAT TAACAGACGT AGTAAAATTT 
TTGAAAGATC CAAAGGTTTT TAATAGGCTA GGCGCTAGAA TGCCAAAGGG TGTGCTTTTA 
GTAGGGGAAC CAGGCACAGG TAAAACTTTA CTTGCTAGAG CAGTGGCTGG AGAGGCAGGC 
GTACCATTTT TTTATATTAG TGGTTCTGAT TTTGTGGAAC TTTTTGTTGG GGTAGGAGCC 
GCAAGAGTTC GAGATCTTTT CAATCAAGCT AAGGCAAACG CACCTGCTAT CATTTTTATT 
GATGAAATAG ATGCAGTTGG TAGGCAAAGA GGATCGGGTC TTGGAGGAGG TCATGATGAA 
AGGGAGCAAA CCCTTAACTC CATATTAGTA GAAATGGATG GATTCGATCC AAGTATTGGA 
ATAATAGTTA TGGCAGCTAC AAATAGGCCT GATGTTCTAG ACAAAGCTTT GCTAAGACCT 
GGAAGATTTG ATAAAAAAGT GGTAATTGAT AGACCTGATG CCGAAGGAAG GAAGGATATA 
TTAAAGATTC ACTTTAGAGG CAAGAAAATA GCCCCCGATG TTGATTTAGA GGTGTTAGCC 
AGAGCTACTC CTGGATTTGT TGGAGCAGAT TTAGAAAATT TAGTCAACGA AGCGGCGCTT 
TTGGCAGCAA GAAACGGGGA AAAGTTCATA ACAATGAAGG ATTGCGAAGA AGCTATCGAA 
AGGGTTATAG TTGGTCCCGA GAGGAAAACG AGAGTGCTTT CCGAACAAGA AAAAGAAGTC 
GTTGCATATC ATGAACTAGG TCATGCTATT TTAGGAACTA TCTTACCAAA TGCTGACCCT 
GTACACAAAG TAACAATTAT TCCTAGAGGT TACGCGGCCT TAGGGTACAC CTTACAGTTA 
CCTTCTGAAG ACAGGTATCT GATGAATAAA TCTGAAATAC TCGATGATAT TGCGGTAATG 
TTAGCTGGTA GAGCCGCAGA AGAAATAATA TTCGATGAAA TTACCAGCGG AGCCGAAAAT 
GATTTAAAGC GAGCTACAGA AATGGCAAGA AGGATGGTAG AAAGTTTTGG TATGAGCGAA 
AAAATAGGTC CTGTAGCTTG GGCTAGCGAA AGTGAAGAAA CGTTTTTAGC ACGTGAACTA 
TTTAGAGAAA AAAACTATTC GGATGAAACT GCAAAAGAAC TGGATTCTGA GGTAAAGCAA 
ATAATAAATA AAAGCTATGA AAAGGCTAAA TCAGTGTTGT TAGAGAACAA GGAGAAGCTA 
CAATTCATTG CTCAATATCT TTTAAAAAAG GAAACTATCT CAGGACAGGA ACTAAGAGAC 
TTATTACAGA AAGATACAGA TGACCTAAAG GAATATGTTG AAAATCTTGG AGTATCCTCA 
ACTCAAGAAG AAGCAAAGGT GGTAAACTAT GAGTACCTTT CTAGAGAAAA TAATCTCATT 
GAAAGGAAAG GAATTTAA 

 

Protein sequence

MQNKRNQSRV LWLLLIYITI GIFIYVGVNS LIGTPDVSKI EYSELVQMLE DKKIVSLEIE 
DSGYARARDN RGLYYETYAP TLLSDQQYVY GLANQGIEIK YVRSLENSWW ISILTFLLPV 
FLLIFLFTFL FRSSGGGANQ GMNFIKSPAK KYDPKKTRTT FNDVAGVKEA KEELTDVVKF 
LKDPKVFNRL GARMPKGVLL VGEPGTGKTL LARAVAGEAG VPFFYISGSD FVELFVGVGA 
ARVRDLFNQA KANAPAIIFI DEIDAVGRQR GSGLGGGHDE REQTLNSILV EMDGFDPSIG 
IIVMAATNRP DVLDKALLRP GRFDKKVVID RPDAEGRKDI LKIHFRGKKI APDVDLEVLA 
RATPGFVGAD LENLVNEAAL LAARNGEKFI TMKDCEEAIE RVIVGPERKT RVLSEQEKEV 
VAYHELGHAI LGTILPNADP VHKVTIIPRG YAALGYTLQL PSEDRYLMNK SEILDDIAVM 
LAGRAAEEII FDEITSGAEN DLKRATEMAR RMVESFGMSE KIGPVAWASE SEETFLAREL 
FREKNYSDET AKELDSEVKQ IINKSYEKAK SVLLENKEKL QFIAQYLLKK ETISGQELRD 
LLQKDTDDLK EYVENLGVSS TQEEAKVVNY EYLSRENNLI ERKGI