Gene Pmob_0729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_0729 
Symbol 
ID5756790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp781327 
End bp782082 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content40% 
IMG OID641301932 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001567776 
Protein GI160902195 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0262547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGAA GATTAGAAGG AAAAGTTGCT ATTATTACAG GAGCCGCAAG AGGAATGGGA 
AGAGCTGAAG CTGAACTCTT CGCAAAAGAG GGAGCGAAGG TCGTTGTTGC AGATATTTTA
GAGAAGGAAG CAAAAGAGGT AGCAGATAAA ATCAACAAAG ATGGATATGA AGCAATGGCT
GTAAAACTTG ATGTTACAAA AGCTGACGAA TGGAAAAAAG TTGTCGATCA GGTAACAGAG
AAATGGGGTA AGGTTGATGT TTTAGTAAAC AACGCGGGAA TTTTCCCTAG AAGTGGTGTT
GAGGATGCAT CTGAAGAAGA ATGGGATCGT GTAATGAACG TAAACGCAAA GAGCCAATTT
TTAGGTATAA AGTACGTGTT ACCAGCAATG AAGAAGGCAA CAAAGGGCTC TATAATTAAT
ATTTCTTCTA TTTATGGACT CATAGGTAGT GGTGCTGCTG TGGCGTACCA TGCTTCAAAG
GGCGCCTCAA GATTGTTAAC AAAAACGGTT GCAGCCGAAC TCGCTAAATA CAATATTAGA
GTAAATTCTG TACATCCTGG TGTAATAAGA ACACCGATGA CTGATGAACT GTTAAAAGAT
GAACAATCAG CTAAGGGTAT CCTTGGAACT ACTGTACTCG GTAGACCTGC TGAACCTGAA
GAAGTTGCTT ATGGAGCATT ATTCTTAGCT TCCGATGAAT CCTCGTTCAT GACCGGTTCT
GAATTGGTTA TTGATGGAGG ATATACAGCA TTATAA
 
Protein sequence
MAGRLEGKVA IITGAARGMG RAEAELFAKE GAKVVVADIL EKEAKEVADK INKDGYEAMA 
VKLDVTKADE WKKVVDQVTE KWGKVDVLVN NAGIFPRSGV EDASEEEWDR VMNVNAKSQF
LGIKYVLPAM KKATKGSIIN ISSIYGLIGS GAAVAYHASK GASRLLTKTV AAELAKYNIR
VNSVHPGVIR TPMTDELLKD EQSAKGILGT TVLGRPAEPE EVAYGALFLA SDESSFMTGS
ELVIDGGYTA L