| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0659 |
|---|
| Symbol | pyrF |
|---|
| ID | 5756895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | - |
|---|
| Start bp | 708713 |
|---|
| End bp | 709582 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641301867 |
|---|
| Product | orotidine 5'-phosphate decarboxylase |
|---|
| Protein accession | YP_001567713 |
|---|
| Protein GI | 160902132 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
|---|
| TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.102908 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATAATAG ATAGATTATT CAACGAGGTT GAAAAAAAGG GGAATGTTTG TGTAGGATTG
GATACCCATT TGGATTATAT ACCGGTTAAC TTAAAAGAAA AGTATCAAGA TATTGATGAA
ATTTTGTTTG AATTCAACAA AGAGATAATA GACAAAACAT ATGATTTGGT ACCCGTCTAT
AAATTACAAA TAGCATATTA TGAAGCATAT GGCATAAAAG GTCTTTTAGG GTATAAAAAA
ACGATAGAGT ATTTGAGAAG TATAAAAAAG ATAACAATCG GGGATATAAA AAGAGGAGAT
ATTTCATCCA CTGCTCAGAT GTACGCTAAA GCTCATTTTG AAGGGGAGTT TGAGGTTGAT
TTTGTAACGC TGAATCCGTA TCTTGGTTTT GATTCCTTAA CCCCTTACCT TAAATACATT
GAAAGTGGAG AAAAAGGAGT CTTCGTACTT CTAAGAACAT CGAATCCAGG AGCCAAAGAC
ATACAGTATT TGAAAGTATC TCCAAAAGAT GAATATCTTT ATTACATTGT GGGAGACAAA
CTCAATGAAA TAGGGGTTAA GTACCGAGGG AGTTGTGGTT ATAGTTCAAT AGGTGCGGTT
GTAGGTGGAA CACATATTGA GGAAGCAAAA GAAATTAGAA ATAGATACAA AAACATGTTC
TTTTTGATTC CTGGATACGG TCATCAAGGG GCTACTGGGA AAGACGTTTC CCTTTATTTA
AACAAAGGTA ATGGCGGCGT TATCAACTCT TCAAGGGGAA TAATTACCGC TTATAAAAAT
TACAAGGATG GGGACCAAAG GTTTGCAGAT TATGCCAGAA AAGCCGTACT TGACATGAGG
GAGGATATTC AAAGTGAAAG GGGGGTATAG
|
|---|
| Protein sequence | MIIDRLFNEV EKKGNVCVGL DTHLDYIPVN LKEKYQDIDE ILFEFNKEII DKTYDLVPVY
KLQIAYYEAY GIKGLLGYKK TIEYLRSIKK ITIGDIKRGD ISSTAQMYAK AHFEGEFEVD
FVTLNPYLGF DSLTPYLKYI ESGEKGVFVL LRTSNPGAKD IQYLKVSPKD EYLYYIVGDK
LNEIGVKYRG SCGYSSIGAV VGGTHIEEAK EIRNRYKNMF FLIPGYGHQG ATGKDVSLYL
NKGNGGVINS SRGIITAYKN YKDGDQRFAD YARKAVLDMR EDIQSERGV
|
|---|
| |