| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0653 |
|---|
| Symbol | |
|---|
| ID | 5757707 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | - |
|---|
| Start bp | 702264 |
|---|
| End bp | 703490 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641301861 |
|---|
| Product | SufS subfamily cysteine desulfurase |
|---|
| Protein accession | YP_001567707 |
|---|
| Protein GI | 160902126 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0520] Selenocysteine lyase |
|---|
| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTATCTT CCAAAGAATA TGAGGAGATA TTTCCAGCTT TAAAAAGAAA AATAAATGGG
CATAAATTGG TCTATCTTGA CAATGCTGCC ACCACGTTAA GGCCAAAAGA AGTTATGGAT
GCTGTAAATG AATACAGCCT CAACCATCAT TCCAACGTCC ATAGATCAAC ACATACCTTA
GCAGCTGAAG CGACTCAGTA TTATGAAGAT GCAAGAAGTG AAGTTGCAAA TTTCATAAAC
GCTGAAGCCG AAGAAGTTAT TTTTACAAAA GGTGCGACTG AATCTCTTAA TCTTATAGCT
TATTCCGTTG CAGTTTCAAA TATTTTGCAA TCTGATGACG AAATTTTGAT ATCTACAATA
GAACATCATG CAAACTTTGT TCCCTGGCAG CAAATAGCCA AAATTTTTAA TTTAAAGATA
AAATACTATC CCGCTAAAAG TGGGATTTTT GATTTATCTG ATTTTCTCAA GCATATTACA
AATAAAACGA GGTTAGTAAG TATTACCGCT TTGTCAAACG TTACCGGTCA ACTTATTCCA
GTTAATACTT TAATAAAACA AATTAGAAAT ATCAGACAAG ATGTAATTAT TGTTGTGGAT
GGGGCTCAAG CTGTACCTCA CCTTCCTATC GATGTAAAAA AAATGGATTG TGATTTTATA
GCCTTTTCTG GCCATAAGAT GCTTGGACCC ACGGGAATAG GTGTGTTGTA TGGTAAAAGA
AAGTATTTAA ACATGATGAC CCCTTTTTTG TTTGGGGGAG AAATGATCGA TAAAGTTTCT
ACCGATGGAA CTACTTTTAA CGTGTTGCCT TACAAATTTG AGGCGGGAAC TCCAAACGTT
GACGGAGCCG TAGGATTAGC TAAAGCCATA GAAATACTTG AAAGTATTGG CATGGATAAT
ATTCAAGAAC ATGATAAACA ACTCACCTCT TATGCATTGA AAAAATTAAA AGAGTTAGAT
TTTTTAGAAA TATTCGGCCC TCAAGACGAA ACGCAGCAGT CAATAATATC CTTCAATATG
AAAGGTGTTC ATCCACACGA TGTAGCGCAT ATGTTGAACG ATTTGACTGG AATAGCCATT
AGAAGCGGTC ATCATTGTGC ACAGCCATTG ATGAAAGAGT TTGGTACAAC CGCCACTTGT
AGGGTAAGCT TCTATTTGTA TAACGAAGAA GAAGATGTTG ATAAATTATG TGAAGGATTA
AAAAAGGTTT GGGAGTGGTT AAAATAG
|
|---|
| Protein sequence | MLSSKEYEEI FPALKRKING HKLVYLDNAA TTLRPKEVMD AVNEYSLNHH SNVHRSTHTL
AAEATQYYED ARSEVANFIN AEAEEVIFTK GATESLNLIA YSVAVSNILQ SDDEILISTI
EHHANFVPWQ QIAKIFNLKI KYYPAKSGIF DLSDFLKHIT NKTRLVSITA LSNVTGQLIP
VNTLIKQIRN IRQDVIIVVD GAQAVPHLPI DVKKMDCDFI AFSGHKMLGP TGIGVLYGKR
KYLNMMTPFL FGGEMIDKVS TDGTTFNVLP YKFEAGTPNV DGAVGLAKAI EILESIGMDN
IQEHDKQLTS YALKKLKELD FLEIFGPQDE TQQSIISFNM KGVHPHDVAH MLNDLTGIAI
RSGHHCAQPL MKEFGTTATC RVSFYLYNEE EDVDKLCEGL KKVWEWLK
|
|---|
| |