| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0611 |
|---|
| Symbol | |
|---|
| ID | 5756978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 663787 |
|---|
| End bp | 664767 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641301822 |
|---|
| Product | electron transport complex, RnfABCDGE type, D subunit |
|---|
| Protein accession | YP_001567668 |
|---|
| Protein GI | 160902087 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
|---|
| TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.798046 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAATCTTA GCACTGAAGC GGCTCCCCAT TTTAGAACTA CCAATACTAC TAGAAAAATT
ATGATCGATG TTTTGATATC ATTGATACCT GCGGTTATTG CTTCAACGTG GATCTTTGGT
TTTCGAGCAC TTTTTATTAT GTTATTTTCT ATGGTTTTTG CAGAAATGTT GGATTTTTCG
ATCGTTCGTT TCATAAGAAA GCAAAAAGAT CACATCCCTG ATTTTTCCGC TTCTGTTACA
GGGTTACTCT TAGGTATGAA CCTTTCTTTA GCTGTTAACT GGTGGCAAAT TATGTTAGGA
GTGGTCATTG CGATAATTTT AGCGAAACAA GTATTTGGGG GGTTAGGTCA AAACTTTTTT
AACCCTGCTT TAGTTGGAAG GGCTTTTATG TTGATATCTT TCCCTACAGC TATGACCACC
TGGTATGTAC CTTTTTATTA CCAGAATCCT GATATTGTTA CTTCTGCCTC CGTACTGGGA
ATAATTTCTG AAGAAGGAAT GAGCACAGTA CTCCAAAATT ATACTTACTG GGATATGTTC
ATCGGAACAA TTCCCGGTTC TATCGGAGAA GTTAGCGCTT TAGCTTTAAT TATTGGTTTC
ATATACTTAG TCATTAAAGG TAGAATAAAA TTGATGATCC CTGTATCCTA TATAGGAACG
GTTTTAATTT TTAGCTCTGT TTTTTACATG GTTGATCCTA CCAAATTTGG AACTCCCTTG
TTCCATCTTT TAGCAGGTGG CTTAATATTA GGTGCTTTGT TCATGGCAAC GGATATGGTT
ACTTCTCCAA TGACCAAAAT GGGCCAGCTC GTTTTTGGTG TGGGAGCTGG AATTTTAACC
ATGATCATAA GATTTTTTGG TAGTTACCCC GAAGGTGTCT CCTTTTCAAT ACTTATCATG
AACGCCTTTG TCCCTTTGAT TGATGATTGG CTAAAACCAA AAATTTATGG AACAACCAAA
GGGGAGATAA AACATGCGTG A
|
|---|
| Protein sequence | MNLSTEAAPH FRTTNTTRKI MIDVLISLIP AVIASTWIFG FRALFIMLFS MVFAEMLDFS
IVRFIRKQKD HIPDFSASVT GLLLGMNLSL AVNWWQIMLG VVIAIILAKQ VFGGLGQNFF
NPALVGRAFM LISFPTAMTT WYVPFYYQNP DIVTSASVLG IISEEGMSTV LQNYTYWDMF
IGTIPGSIGE VSALALIIGF IYLVIKGRIK LMIPVSYIGT VLIFSSVFYM VDPTKFGTPL
FHLLAGGLIL GALFMATDMV TSPMTKMGQL VFGVGAGILT MIIRFFGSYP EGVSFSILIM
NAFVPLIDDW LKPKIYGTTK GEIKHA
|
|---|
| |