| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0521 |
|---|
| Symbol | |
|---|
| ID | 5757619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 567123 |
|---|
| End bp | 567974 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641301720 |
|---|
| Product | RpiR family transcriptional regulator |
|---|
| Protein accession | YP_001567578 |
|---|
| Protein GI | 160901997 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1737] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.207231 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAA TTCAAGCTTT TCTTAATTCT AGGATGCCTA CTTTCACTAA ATCTGAAAAG
AAAGTAGCGG AGTATATATT AAATAGTAAA AAAGAGGACA TAACAAGGAT TACCATAACT
GAATTAGCTA CAAAATGCGG AACAAGCGAG GCTACAATTG CTCGATTCGT TAAAAAAGCA
GGTTTTGAAA CTTTTCAAGA TTTCAAACTT ACGTTAGCCT TGGATAATAA TGAAGATATA
TTTGAAGAAG AAAAAGATAT AACCATCTTC AAAAATGACT CTCCTCAAGA AATACTCAGA
AAGGTAAAAT TGGGTTCTCT TAAATCGATT GAGAGCACAA CTTCAATACT AGACATAAAC
AACTTTTTAC AAGCTGCAAA TTTCATTAGA TCTGCTAAAA GAATAGAGAT TTACGGGGTA
GGGTCCTCGT CAGCAGTTGC CAAAATATTA CAATATAAGT TAACAAGGCT AGGCTTCCCA
TCTTACGCAT TGGAGGACCC TCACATGCAA GCTATCTCCG CAGCTACTTT GAACTTTGGA
GATTTAGCAA TTGGAATAAG CCAAAGTGGA TCCACTAAAG ACACAGTAGA CTCGTTAAAT
GTTGCTAAAA AGCATGGGGC AACAACAATT AGTTTGACTG AACATGCGAA TTCTCCTATT
ACAAAATATT CTGACGTGGT ATTAGAAATA TTCTCTGGTG AAAACCCTGT AAAAACTAGC
GCAGGGAGAT CTATCCTGGT TCAAATTTTT GCGGTGGAGA TCTTGTCTGG CTTGTTGTAT
TCAATAGAAT ATGAAAAGGC TTTAACTACA GGAAAAGACA CTGCAAGAGC AGTCGTTAAT
AAATTATACT GA
|
|---|
| Protein sequence | MSKIQAFLNS RMPTFTKSEK KVAEYILNSK KEDITRITIT ELATKCGTSE ATIARFVKKA
GFETFQDFKL TLALDNNEDI FEEEKDITIF KNDSPQEILR KVKLGSLKSI ESTTSILDIN
NFLQAANFIR SAKRIEIYGV GSSSAVAKIL QYKLTRLGFP SYALEDPHMQ AISAATLNFG
DLAIGISQSG STKDTVDSLN VAKKHGATTI SLTEHANSPI TKYSDVVLEI FSGENPVKTS
AGRSILVQIF AVEILSGLLY SIEYEKALTT GKDTARAVVN KLY
|
|---|
| |