| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0338 |
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| Symbol | |
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| ID | 5758292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Petrotoga mobilis SJ95 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010003 |
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| Strand | - |
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| Start bp | 357575 |
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| End bp | 360682 |
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| Gene Length | 3108 bp |
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| Protein Length | 1035 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 641301541 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_001567403 |
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| Protein GI | 160901822 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.191067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGAGTA AATGGAAGGT TTTTTGGGAC CCAAAGGCTT CTTATTATCA ACAAAAAGAT
AAAGTTGCAA AAACCTTATC TAGTGCTTTG GGAATTTCCG ACTTTTTGGC AAAATTATTA
GTATCTAGAA ATATTGAAAC ACCCGAAGAG GGAGATAAGT TTTTGAACCA TTTAGAATTG
GAAAGCTTTG ACCCTTATTT GATGAAGGAT ATGTCAAAAG CCGTAGAAAT TCTCAAACAA
ATTAAAGAAA AAAAGGAAAA AGTGGCGATC TTCGGTGATT ACGACGTTGA TGGGGTAACT
GCAACTTCAG TTTTGTATCT TGGCTTAAAA AAAATAGGTT ACGATGTAAC TTCTTACATT
CCATCTAGAA TAGAAGAAGG TTACAGCCTA AACGTTAAAG CTATAGAAGA GTTAAAAAGC
AAAAATTATA ATAATATTAT TACTGTTGAT TGTGGTACAA CATCCATACA AGAAATTGAA
TATGCGAAAA GTCTTGGAAT GAAAGTTATA GTTACCGATC ATCATTTACC CCAAGAAAAT
CTCCCAAAAG CTGATGCAAT ATTGAATCCA AAGAGGGAAG ATGACAAATA TCCTTTCAAA
GACCTGGCAG GAGTAGGCGT AACTTTTAAA TTGCTACAAG CCTTATACAA AAGTTACGAT
AATTCTTTAG ACCCCTTTGA ATATATAGAT CTGGTGGCAG TGGGTACTAT TGCTGACATA
GTATCGATAA CTTCGGAAAA TCGATACTTG GTTAAGATAG GATTGAACAA GTTAAAGACT
AATCCAACCA AAGGCTTAAA ATATTTGCTC GATGAATTGA AAATAGTTGA TTCTGAGATA
AATTCGCGCA CCATCACTTT TAAAGTTGCT CCGAAGATAA ACGCTGCTGG AAGAATGTCA
GACGCAAGGT CTGCGTTTAA TTTGTTGATT GAGAAAGATG AAGAAAAATT AAAAAAGGCG
GTTTCAGAAT TACTCCGACT AAATTCAAAA AGACAAAGTA CTGAAAAGGA AATCTATCTG
TACTCTTTAA GTTTGTTAGA TTTGTACCCT GAATACAAAA AGGATCCGGT ATTGGTATTA
AGCGGCGAAG ACTGGCATAT GGGAGTTCTT GGGATAGTGG CTTCCAAACT ATCAAATCAA
TTCAATAAAC CCGTTTTGAT GATATCAAAA AATCAAGAAA TGGGTAAAGG TTCAGGAAGA
AGTCCTCAGG GCATAGATTT AATGGAGCTC CTTCTCAAAG TCAATGAAAG AGGGATTTTT
GAAGAGTTCG GCGGTCATAA GTTTGCTGCA GGTTTTTCCA TTCTTTCTAA AAATATAGAA
GCTTTGAGAA AGGAGATTAA CGAGGTTTAC AAGGAGTTAT ATGGAGATAA AAAATTAACG
TCTCAAATTG ATGTGGATAT GGAAATAGAA GGAATATGGG AAACGATGTT TGAAGATATA
AACAAGTTAG AACCTTTTGG GTATGGGAAT CAAGAACCAG TTTTTTTGAT AAAAAACGCT
AAATTAGAAA ACATAAGATT CTTTCGTAAC GGTTCTCAAA GTTTTTCAGG AACGCTCAAT
AAAGATTCCT TAATCATAGA TATTTTAGGT TACGATTTGG GATACAGATT AAGCGAGCTA
ACAGAGAATA GTAAAAAAGA CCTATTTACA GATCTTGTGG GTACCTTTAG AATAGAGAAC
TCTTATAATT TAAAAAATAG TTACGTTAAA TTTTACTTGC AAGATTTGAT GGTTAATAAG
GAAATACAAC AAGGTGAAAC TGCAAAATTG AACTTTGCAT CTAATGTTCT TCATGATGAG
CTGAACAAGA TCATGAATAT AGAAATATTA AACGATAATT TAACTAGAAA TAAGGTAGCG
ATGTTTCTTC CGAGTAAGAT CAAAAACGAT TCTTTACTGA AAAAAGTTCA GTTATCATTA
GAAGAGCATC AAAAGTTGAT AATTGTTTCT GCAACAAATA GTTTATTGGA ACATATATAT
AAGATAATAA ACACTTATTT TCCTGAGAAT TTATTATATT TTAACAATCA ATACATCCTT
ACACCAGAAC TTATATCTAA TTATAGTGTG ATATTCGTTA CAGTACCCAA ATTTATTAAA
AATCGTGAAT TACTTGATTC TATGCAAGCT GAAATTATTA TTGACGAACC CTTCTATTCA
TTATTTCATC CGGTAGTGAG AAAAGTTCCT GAATATCAGC AATTTAGAAA ATATGCTCTT
CAAAAGTCTA AAATTAGTAT TTTTAGTTCT ATTTACAGCG AAGAGCTAAA AGAATTATTA
AAAAGAGCAG GATTTAAAAT CCTTATATCT TTCTCTAATA ATAATAGTTT TGAAGTGGTT
AGAGAAAGAA ACAATATTCT GGGACTTTTG AAGGATTATA CAAATGAAAG AAATGGCAAA
ATATTGGTTT TGAACGATTA TGAGAGGCAA AAATCTTTAG TGAGACTGTT AGACGAAAAA
TTACAAGTTG ATGAGAACGA TATAAGACTT TTCAACCACT CAATGAGTTT TAGGGAAAAA
CTTATTTCTA GAGAAAAATT TAAAAATGAA AAAGCTAATT TTTATATAAC TTCTTTTTCT
AACAACGGTA TAGCGTTTGA GGTTAAACAA TTTTCTCCAA TTTTGATTAT TGTGGATGTT
CCAAAGACGG ACATAGAGCT TTTAGACCTG GTTTCTACAT GGATGAAAAA AACTCAAAGA
ACAACTATCA TATTGGCTTA CAATAATCGG TTCAAAGTTA AATTACTTTA CGAGTATTCA
AGAAAATATC CATCTTTCAA AGTATTAAAA CTAGTCTATG ATTTTATAGC CGACGGTCAT
TACAAAGTAG AGGAGATACA AAATTCTCTT TTGAAGGGTG ATAAATCGTT ATCAGAGACC
GTTTTAAACG TGATGGAAGA TGCAGGGTTG ATAAAGGTGA ATGAAGAAGA AGTAGAAATA
TTGAATAATT TTAATCTAAA GGATTTACGT GAAAGTTCCA ATTTTAAGGA AAATATATTA
GATAATTGGA TATTGAAAAA TTCCATAAAT TTCTATGAAA ATTTAGACAC AAGAGAATTA
ATTGAGTTCT TGAAAGGTAA TCCTAAAGAA GGAGCAAGAA GTTTATAA
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| Protein sequence | MESKWKVFWD PKASYYQQKD KVAKTLSSAL GISDFLAKLL VSRNIETPEE GDKFLNHLEL
ESFDPYLMKD MSKAVEILKQ IKEKKEKVAI FGDYDVDGVT ATSVLYLGLK KIGYDVTSYI
PSRIEEGYSL NVKAIEELKS KNYNNIITVD CGTTSIQEIE YAKSLGMKVI VTDHHLPQEN
LPKADAILNP KREDDKYPFK DLAGVGVTFK LLQALYKSYD NSLDPFEYID LVAVGTIADI
VSITSENRYL VKIGLNKLKT NPTKGLKYLL DELKIVDSEI NSRTITFKVA PKINAAGRMS
DARSAFNLLI EKDEEKLKKA VSELLRLNSK RQSTEKEIYL YSLSLLDLYP EYKKDPVLVL
SGEDWHMGVL GIVASKLSNQ FNKPVLMISK NQEMGKGSGR SPQGIDLMEL LLKVNERGIF
EEFGGHKFAA GFSILSKNIE ALRKEINEVY KELYGDKKLT SQIDVDMEIE GIWETMFEDI
NKLEPFGYGN QEPVFLIKNA KLENIRFFRN GSQSFSGTLN KDSLIIDILG YDLGYRLSEL
TENSKKDLFT DLVGTFRIEN SYNLKNSYVK FYLQDLMVNK EIQQGETAKL NFASNVLHDE
LNKIMNIEIL NDNLTRNKVA MFLPSKIKND SLLKKVQLSL EEHQKLIIVS ATNSLLEHIY
KIINTYFPEN LLYFNNQYIL TPELISNYSV IFVTVPKFIK NRELLDSMQA EIIIDEPFYS
LFHPVVRKVP EYQQFRKYAL QKSKISIFSS IYSEELKELL KRAGFKILIS FSNNNSFEVV
RERNNILGLL KDYTNERNGK ILVLNDYERQ KSLVRLLDEK LQVDENDIRL FNHSMSFREK
LISREKFKNE KANFYITSFS NNGIAFEVKQ FSPILIIVDV PKTDIELLDL VSTWMKKTQR
TTIILAYNNR FKVKLLYEYS RKYPSFKVLK LVYDFIADGH YKVEEIQNSL LKGDKSLSET
VLNVMEDAGL IKVNEEEVEI LNNFNLKDLR ESSNFKENIL DNWILKNSIN FYENLDTREL
IEFLKGNPKE GARSL
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