| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0220 |
|---|
| Symbol | |
|---|
| ID | 5756870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 222998 |
|---|
| End bp | 225370 |
|---|
| Gene Length | 2373 bp |
|---|
| Protein Length | 790 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 641301420 |
|---|
| Product | peptidase S16 lon domain-containing protein |
|---|
| Protein accession | YP_001567289 |
|---|
| Protein GI | 160901708 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1067] Predicted ATP-dependent protease |
|---|
| TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.229141 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTAA CTTTAAGTGA TTTTGAAATT AAAATCCCAG ATATCAAAAT CGATAACACT
TCAGAAATAA AAATTGGTTC TTATCAAGAT TACACCATAC AAACGGATGC TTGTGAAATT
TTACAATTTG CCTTGGAAAG CAGCAACGAT TCAAACAATG TTTTCTTAGT TGGTCCAAAT
CGTAGTGGTA GAAGAGGTAT GACTCGAAAG ATAATCGAAA GAATATCGTT AACTCAAAAA
GCTCCTCAAG ATCTTATGTA TGTTTTTAAT TTTAAGGAAG AAAAGAAACC CAAGTTGTTG
AAACTGCCCG CCGGAGAAGC CAAAAATTTC AAATCTGAAT TGCAATCTAT TATTAATTCC
TCTGTACAAG TTTTAAATAA AACGATGCAG ACAGAAGAAT TTCAACAAAG GTTAAGTTCG
TTAGAAAAAG AATACAACGA GCAGAGGGAA AAATTGTGGT CAGATCTGAG AAAACAGGCT
CAAGCTCTTG GTTTTATACT TGAGGCTTCT GAAAAAGGTA TAGTGAGCGT TCCAGTGTAC
GATGGCAAAA AAATAAGCAC CTCTGAGTTT GAAAATCTTC CGGAAGAGAT AAAAGAGTAT
TTTCGAAAAA ATTCCGAGAA GTTGCGAGAA TTAATTGAAA AAACAATGGT AAAGATCACG
GAGATGGATA AAGAATACTG GGAGGAAGTT AAAAACTTAC GACGTTACTG GGCAGCTTTT
AGCTTAGCTA AGCTTTTCGA ACCCCTTGAA AAGAAATATC TCAAATATTC TGATGTTTTT
GAATACCTTC AAAACTTGAA AGAGGACATA GCTTCTCACC TATCCCAATT AACTTCCGAA
AATCAAAATC TAATAACTTA TCTTAAAGAA AAAAGATACA ATGTCAACAT TATAGTGGAT
AATTCTTATC TACAAGGTGC ACCTGTGATA GAAGAAGACA ATCCCACTTT TTCAAATTTA
GTTGGTAGAA TAGAGTATTA TTCCCAAATG GGACTCCTTC AAACGGATTT TACAATGATA
AAATCTGGAG CTTTTCACAG GGCAAACGGT GGTTATCTAA TAATGGAAGC AGAAAAAGTT
TTAAGAAAAC CTTACGCGTG GGAGGTAATT AAAAGGTTTT TATCGGAGAA AGAAGTAAAA
ATTGAAAATA TTCAAACCGC TGAAGGCTAT TCGAGTGTTG AAAGTTTGGA ACCAGAACCT
TTATCTTTAA CCGTTAAAGT GATTCTCATA GGAGAAGAAT GGGTGTACAA TTTATTAAGA
GTTTACGATA GCGAATTCGA AAAACTTTTT CCCATAAAAT CACAATTTGA CTATGAGGCA
GAGTTAAGCA ACGAGAATTT AAATAAATTT TTAGCTTTCT TAAGCAACAC AGTGGAAGAA
AACGATATCT CACACTTTAC AAAAGATGCG ATTGAAGAGA TTATCAAGTA CAGTTGTAGG
ATGAATGGAA ACAACAAAAG GTTCTCCTTA AGATTGGGGG AAATTAAGAA TCTACTAATA
GACTCTTTCA ACATTTCACG GAAAAATGGA TCAAGCCCAT ACATAACCGC CAAAGATATA
AAAGATACTA CAAAGTTTAG AGAAAAAATG TTTTCCTTTC ATAAGAAAAA ATTATTTAAT
GCGATAAAAG AACAAAAGAT TGACATAAGA ACTGAAGGCT CTGAAGTCGG ACAAATAAAT
GGATTGACTG TTTTGGATAC AGGAGATTTC ACCTTTGGGC ATCCCGTCAA AATAACAGCA
AAAAGTTACA GATCCTCTTC TGAAAAAATC ATAAACATAC ACAGGGATAT CGATTTAAGC
GGGAAAATAT ACAAAAAATC CTCATTGATC ATAGAAAACT ATTTCAAACA TAAATTTTCT
TCTTTCATAG AAACAGGTTT CGGTGTATCT TTAAATTTTG AACAAGTTTA TTCTATCATC
GAAGGAGACA GCGCTACAAT AGCAGAAACG CTGGCTTTAA TGTCTTCCAT AGCTAACATT
CCATTGAAAC AAAATATTGC CATCACCGGA TCTATGAATC AAAACGGAGA AGTTTTGCCA
GTTGGAGGAA TAATCGAAAA AATTGAAGGA TTTTACGACG CCTGTAAAAA TCTCAATTTT
ACTGGAGATC AAGGGGTGAT TATTCCAAGT AAAAATATCG ATAATATCGT ATTGAAAGAC
GAAATAAATG AAGATATACA AAATGGAAAG TTCCATATTT GGGCTATTGA TAATATAGAT
GAAGGGATCG AACTAATGAC AGATTACAAA GCAGGGACAC CAAATGAAAA CGGTGAATAC
GAAGAAGGCA CATTTTATTA CTATGTAAGT GAAAACCTCA AGAAATTATC AAAAGAGGAG
AAAAAAGAAA AAGACGAAAA AGATAACAAA TAG
|
|---|
| Protein sequence | MKLTLSDFEI KIPDIKIDNT SEIKIGSYQD YTIQTDACEI LQFALESSND SNNVFLVGPN
RSGRRGMTRK IIERISLTQK APQDLMYVFN FKEEKKPKLL KLPAGEAKNF KSELQSIINS
SVQVLNKTMQ TEEFQQRLSS LEKEYNEQRE KLWSDLRKQA QALGFILEAS EKGIVSVPVY
DGKKISTSEF ENLPEEIKEY FRKNSEKLRE LIEKTMVKIT EMDKEYWEEV KNLRRYWAAF
SLAKLFEPLE KKYLKYSDVF EYLQNLKEDI ASHLSQLTSE NQNLITYLKE KRYNVNIIVD
NSYLQGAPVI EEDNPTFSNL VGRIEYYSQM GLLQTDFTMI KSGAFHRANG GYLIMEAEKV
LRKPYAWEVI KRFLSEKEVK IENIQTAEGY SSVESLEPEP LSLTVKVILI GEEWVYNLLR
VYDSEFEKLF PIKSQFDYEA ELSNENLNKF LAFLSNTVEE NDISHFTKDA IEEIIKYSCR
MNGNNKRFSL RLGEIKNLLI DSFNISRKNG SSPYITAKDI KDTTKFREKM FSFHKKKLFN
AIKEQKIDIR TEGSEVGQIN GLTVLDTGDF TFGHPVKITA KSYRSSSEKI INIHRDIDLS
GKIYKKSSLI IENYFKHKFS SFIETGFGVS LNFEQVYSII EGDSATIAET LALMSSIANI
PLKQNIAITG SMNQNGEVLP VGGIIEKIEG FYDACKNLNF TGDQGVIIPS KNIDNIVLKD
EINEDIQNGK FHIWAIDNID EGIELMTDYK AGTPNENGEY EEGTFYYYVS ENLKKLSKEE
KKEKDEKDNK
|
|---|
| |