Gene Pmob_0107 details

Gene Information

• Locus tag: Pmob_0107
• ID: 5758184
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Petrotoga mobilis SJ95
• Kingdom: Bacteria
• Replicon accession: NC_010003
• Strand: +
• Start bp: 104256
• End bp: 104918
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 641301308
• Product: flagellar hook capping protein
• Protein accession: YP_001567179
• Protein GI: 160901598
• COG category: [N] Cell motility
• COG ID: [COG1843] Flagellar hook capping protein

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00091952
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTAACT CAGTATCGAT GGATTCTATA TATCAAAGTA CGTATGATGC AAAAAAAGAC 
AGAGAAATAA AAAAAGAATT AGACAAAGAA GCTTTTTTAG AACTGTTGGT TACAGAATTA 
CAAAACCAAG ATCCGACTCA ACCGATGGAA AACAAAGATC TTGTAGCTCA GCTTTCTCAA 
CTATCTTCCA CTGAACAAAT AACCAATATG AGCCAAGCAA TTCAAGAAAT GGTTAACTCC 
CAAATGTCGC TCAATAAATT GCAAGCTGCA AGCTTGATAG GAAAAACCGT TGTGGTGAAT 
GACAACACCA TTGACTTGCA AAGTGGGGTA GCAGAAGGAC TAAACTATGG ATTAGACAAC 
GGCTCCCAAG TATATTTAGA GATTTATGAT TCAAAGGGAC AAGTAGTTTA TACAGAAGAT 
TTGGGTGTGC AGGAAGCAGG GTTACACTCA TATGTTTGGA GCGGAAGAAA CAACGATGGA 
ACTATGATGC CTGATGGAGA GTATCTCTAT GGAATTTACA CCGTAGAAAA TGGCCAAATG 
GTAGCAAATA CCGGTGTAAA AAGTGGAACT GTCGAAGCAG TGAAGTTCTT AGACAACGAA 
CTTTACCTAC TTATCAATGG TGAAATGTAT CCTTATTCAG TAGTGAATGA AATTAGCACC 
TAA 

 

Protein sequence

MLNSVSMDSI YQSTYDAKKD REIKKELDKE AFLELLVTEL QNQDPTQPME NKDLVAQLSQ 
LSSTEQITNM SQAIQEMVNS QMSLNKLQAA SLIGKTVVVN DNTIDLQSGV AEGLNYGLDN 
GSQVYLEIYD SKGQVVYTED LGVQEAGLHS YVWSGRNNDG TMMPDGEYLY GIYTVENGQM 
VANTGVKSGT VEAVKFLDNE LYLLINGEMY PYSVVNEIST