Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmob_0084 |
Symbol | |
ID | 5757510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Petrotoga mobilis SJ95 |
Kingdom | Bacteria |
Replicon accession | NC_010003 |
Strand | - |
Start bp | 81513 |
End bp | 84632 |
Gene Length | 3120 bp |
Protein Length | 1039 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 641301285 |
Product | exonuclease sbcC |
Protein accession | YP_001567156 |
Protein GI | 160901575 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0419] ATPase involved in DNA repair |
TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCAA TAAAATTAAA ATTCCAGGCA TTTGGACCTT TTTTGGAAGA GCAAGAAATA GATTTTAACA AATTAAGAAA CGATACTTTA TTCTTAATTA CAGGTCCAAC AGGTGCAGGA AAAACTACTA TTTTCGACGC TATCTGTTAT GCCTTATACG GAAATGGTTC GATGGATGAA AGAGGAGATG CGATAGCCAG GTCTCATTTT GCAGATGAAA ACACCGACAC ATACGTGGAA TTTGAATTTC AATTTAAAGA TAAAATAATC GAAGTCTCAA GAACCCCTTC TTACGAAAGA TCCAAAAAAG ATGGTGAGGG TACCACAAAG CAAAACAGTC AAGCTAGTAT AAAAATATAT CAAAATGGTG AATTGATATT ACACGAAACT GGGGTTAAAA AAGTAAATAG TAAGGTAGAA GAATATTTAG GCCTTAACTA TGAACAATTC AAGCAAATAG TGATGATTCC CCAAGGAGAA TTCAGAAAGT TTATAACAGC CAATTCAAAT GAAAGAGCGG AGATCTTTAA GAAGATATTT GACATAAGTA TATATGAGCG CTTCGAACAA AAAATAGACG AGATTTTTAA AAATATAGAA AAAGGATTAA AAGAACAACA ACAAAAAGTC AGAAACATAT TAGAAACAAT AAACCTTGAA TCAGAAGAAT ACAAACAATT GTTGAAAGAA GAAAATATCG ATCCTGAAAA TCTAATCGAT CAATTAACAA AGGAAATTAA GAAAAGGGAA ACTTCAAAAG AAGAAACCGA AAAACAAAAA TCTCAAAAAC AAGACAAACT GCAAAAACTA AATACAAATC TTGAAAAGAT AAAAAAAACC AATGAACTAA TCGAAAAGAA AGAGACCCTT AAAAAAGAGA TTGAAGAACT CCAACAAAAT TCCAAGTATA TCCAAGAAAG AGAAGAACTC CTTAACAGGT TAAAAAAGGC AAAAGAGATA CTTCCATACG AAGAAAGATA CGTAGAGTAT TTGAAAGAAT TAAACGATAA AAAGAACCAA CTCAAAGATC AACAAGATAT ATTAGATAAA AGTATGGAAG AAAAGCAACG AATAGACGAA AAATTACCAG AAATTGAAAA GCAATATCAA AAGATATCCG CAGTTGAAAA AGAAATTGAA GATCTCAATC AAAAATTAGA TAAATACGTT GAGTACAAAA ACTTAATAAA AGAATACAAT ACCAAAAAGA AACTCTTGGA TGAAAAGGTT AAAGAAAGCC AAGAAAAGGA CAAGGAACTT TCGGAAACTC AAGGAAAATT GGAACAAAAC GAAAAATATA TATCAGAAAA CGAAGATATA AACGTTGAAA TACTTAAAAA CGAAATTAAT ACAAATGAAA AATTATTATC TGCAGCCAAC GAATTATCCA AAAACTACGA AGAATTGGCA CTCTTACACA AAGATTATAA AAAAGTAAAG AAGCAAAAAG AAGAAATAGA GATAGAAATC CAGAACTTAA GGGAAGAACA AAATAAAAAG ACTACCGATT TTATAAAATC ACAGGCATAT CATCTCGCAA CTACTTTAAA AGAAGGAGAA CCGTGTCCCG TTTGTGGATC TCTTGTTCAC CCTTCTCCTG CCAAAAGTAG TGGAAAATTA ATAACAGAAA AAGAACTAGA GGAAATCAAT CAAAAATTAA ATGAAAAAGA GAAAGAAAAG GCAATGATAC TAAGAAATTA CGAAGATGTA TCAAACAAAT ATTCACAAGA GGTATCTTTA TTTAAATCGG AATACAAAAG AATCTGTGAA GAACTACAAA TCCCCCAAGA AAGCGAGTAT ATATACACTC ATATACAAAA TTTAATAAAA ATACTCGAAG ATAGATTAAA CCAACAAAAA CAAGAATATG GCCAAAAAAT AAAAATATAC AATAAAGTCA AATCCCTAAA AAACGATAAT AAAAAGATCA AAGAAGAAAT TAAAGAGCTA GAAGAACAAA GAGAAAATTT GAGAAAAATT ATTGATGAAT CGAGATCAAA AATTATAGAA CTAGAAACTA AAATCACAAA TCTCAAAGAA CAATTAGAGA ACAAAACTGA AAATGAAATA AAAAGCGAGA TACAAGAAAA AAGAAAATTT ATCCATAATA TCAAAACTAC TTACGAACAA AAAAGAGAAG AAGCTAACAG AATCTCAGAA ATAATAAACT CTTCAAAAGG AACAATAAAA ACATTAACCG AAGACATAAC TAAATTAGAC GACCAAGTAA AAAATGCTGA ACAAAAATTC GATCAAATGG TAGAAAAAAT GGGATTTAAG AATCAACAAG AATATAAAAT ACTGAAAGAA CAAATTAACT TAATAGAAAC TTTAGAAGAT GAAGTTCAAA AATATAAAGA AGAATTAAAG AATAAGCAGA CTCTTCTCAT CGATTTAGAA GAATCCACTA AAAACCTTAA AAAAATTGAT GAAACTCCTA TAGCAAATGA AATAGATCAA TTACAAAAGG AAATTGAAGA ATTAATCAAA AATGAAACAA ATTTAGAATA TGAAATAAAG CATCTTAAAG GCACAAAAAC TAATTTAGAA ACTGTCATAA AAGAGATAGA AAAACAAGAA AAAGAATACT CAACCATAAA GAACTTAAGA GATGTCAGTA AAGGTGACAA CAATACAAGG ATCAGCCTTA GTAAATACGT GCTAGCCTAT TATTTCGAAG AAATATTAGC TCAAGCGAAT CTAAGATTAA ACAAATTAAC AGATGGGAGA TATCATTTGC ATAGATCTTC TAAGGTACTT GATGCAAGGA AGAGCGAAGG TTTAGAAATC ATGGTTTTTG ATATCTACAC TGGAAAAGAA AGAGAAATAA AAACACTTTC AGGAGGAGAA AGTTTTAAAG CTGCACTAGC TCTTGCTTTA GGATTAGCCG ATGTGGTGCA AAGCGAAGCT GGTGGTATTT CTTTAGATAC GATTTTCATA GATGAAGGAT TTGGCAGCCT TGATACAAAC TCTCTTGATA GTGCAATCGA AGTATTAACG GAGCTAAACA GCACTGGGAG AATGGTGGGT ATAATATCTC ATGTAAGTGA ATTGAAAGAA AGAATTAAAT CAAAAATCGA GGTAATACCA GGAAAAACTG GTAGCTACAT AAAGTTTTGA
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Protein sequence | MKPIKLKFQA FGPFLEEQEI DFNKLRNDTL FLITGPTGAG KTTIFDAICY ALYGNGSMDE RGDAIARSHF ADENTDTYVE FEFQFKDKII EVSRTPSYER SKKDGEGTTK QNSQASIKIY QNGELILHET GVKKVNSKVE EYLGLNYEQF KQIVMIPQGE FRKFITANSN ERAEIFKKIF DISIYERFEQ KIDEIFKNIE KGLKEQQQKV RNILETINLE SEEYKQLLKE ENIDPENLID QLTKEIKKRE TSKEETEKQK SQKQDKLQKL NTNLEKIKKT NELIEKKETL KKEIEELQQN SKYIQEREEL LNRLKKAKEI LPYEERYVEY LKELNDKKNQ LKDQQDILDK SMEEKQRIDE KLPEIEKQYQ KISAVEKEIE DLNQKLDKYV EYKNLIKEYN TKKKLLDEKV KESQEKDKEL SETQGKLEQN EKYISENEDI NVEILKNEIN TNEKLLSAAN ELSKNYEELA LLHKDYKKVK KQKEEIEIEI QNLREEQNKK TTDFIKSQAY HLATTLKEGE PCPVCGSLVH PSPAKSSGKL ITEKELEEIN QKLNEKEKEK AMILRNYEDV SNKYSQEVSL FKSEYKRICE ELQIPQESEY IYTHIQNLIK ILEDRLNQQK QEYGQKIKIY NKVKSLKNDN KKIKEEIKEL EEQRENLRKI IDESRSKIIE LETKITNLKE QLENKTENEI KSEIQEKRKF IHNIKTTYEQ KREEANRISE IINSSKGTIK TLTEDITKLD DQVKNAEQKF DQMVEKMGFK NQQEYKILKE QINLIETLED EVQKYKEELK NKQTLLIDLE ESTKNLKKID ETPIANEIDQ LQKEIEELIK NETNLEYEIK HLKGTKTNLE TVIKEIEKQE KEYSTIKNLR DVSKGDNNTR ISLSKYVLAY YFEEILAQAN LRLNKLTDGR YHLHRSSKVL DARKSEGLEI MVFDIYTGKE REIKTLSGGE SFKAALALAL GLADVVQSEA GGISLDTIFI DEGFGSLDTN SLDSAIEVLT ELNSTGRMVG IISHVSELKE RIKSKIEVIP GKTGSYIKF
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