Gene Pmob_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_0080 
Symbol 
ID5757467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand+ 
Start bp77763 
End bp78371 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content34% 
IMG OID641301281 
Product2'-5' RNA ligase 
Protein accessionYP_001567152 
Protein GI160901571 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.91428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAGC TAAAAAATGT AAATAACCAC AATACCGACA AATTAAGATC CTTCATCGCC 
ATCGAAACTA ATGAAAAATT AGAAGGGTTG TTGACTGATT TAATCGAAAG GTTTCAAAGG 
ATGGGATTTA AAGCAAATTG GACAAATGCG AAAAATGTCC ATTTAACCTT GTTTTTCCTT 
GGGGATCAAA AGATGGAAAA GATAGCTCAA TTAGCTTATA AAATTGGCGA AAGAGTATCC 
GGATTTCCTA CTTTTCATTT TAATATCCAC AAGATGGGCT TCTTTGAAAA TGATTCTCAG 
CCAAAGGTCT TATGGCTGGG AATAGAAGAA GACAATACCT TAATCGGTTT GTACGAAGAA 
ATAAAGAAGG TACTAAAGAT TTCAGAATTA GAGGTTAAAG ATACCAATTT TTTACCTCAT 
ATTACAGTCG GAAGAGTTAA ATCGTTCCCT AACCACTGGA AAGAACTAAT TAATTCTGTC 
ACTTTTGATC AAATCCAAGT ATACGTAAAT TCTATCGGAA TATACTCTTC TGAACTCACA 
AGAAAAGGTC CAATATATAA AAAACTTTAC ACTATCGACT TTGAAGGAGG CGTCATCATT 
AATGGCTAA
 
Protein sequence
MTQLKNVNNH NTDKLRSFIA IETNEKLEGL LTDLIERFQR MGFKANWTNA KNVHLTLFFL 
GDQKMEKIAQ LAYKIGERVS GFPTFHFNIH KMGFFENDSQ PKVLWLGIEE DNTLIGLYEE 
IKKVLKISEL EVKDTNFLPH ITVGRVKSFP NHWKELINSV TFDQIQVYVN SIGIYSSELT 
RKGPIYKKLY TIDFEGGVII NG