Gene Pmob_0064 details

Gene Information

• Locus tag: Pmob_0064
• ID: 5758004
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Petrotoga mobilis SJ95
• Kingdom: Bacteria
• Replicon accession: NC_010003
• Strand: +
• Start bp: 60570
• End bp: 61181
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 641301265
• Product: RnfA-Nqr electron transport subunit
• Protein accession: YP_001567136
• Protein GI: 160901555
• COG category: [C] Energy production and conversion
• COG ID: [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD
• TIGRFAM ID: [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTCAGA AAAGTTGGAT AGAAATTGCT AAAGATAATT TATGGTATAA CAATCCTGTA 
TTCATCCAAA TACTCGGAAT ATGTTCCACA TTAGCGGTAA CTAACACTTT AATAAACACA 
TCCATTATGA CTCTGGGAGT CGTTTTTGTG ACAGGCTTAT CGGCGTTGAC GGTTTCTTTG 
TTAAAATCTT TCATTCCTAG GAAAGTCAGA ATGATAGCCC AAACTTTGAT AATATCTTTT 
TATGTTATAA TTGTTGATAT CGTTCTACGG GCTTATGTAC CTGATGTCAG TAGAGCCTTG 
GGACCTTACG TAGGTTTGAT CATAACTAAT TGTATAATAA TGGGAAGAAC AGAAGCTTTT 
GCTCAATCTA ACCCTCCATT ACTTTCTCTG TGGGATGGTT TAACTAGTGG AATAGGGTAT 
ATGTATGTTC TTTTGATGGT TGCATTTGTG AGGGAGTTAT TGGGCTTTGG AACAGTTTTT 
GGATTTCAAG TATTACCAGA TAACTTTGTA AATTGGACTA TAATGGTTAT GCCTCCAAGT 
GCCTTCTTTA TGTTAGCTAT TTTTATATGG ATACTCAAAG GTTACCAGTT TAGAAAGGAG 
GTTAAAAAAT AA 

 

Protein sequence

MAQKSWIEIA KDNLWYNNPV FIQILGICST LAVTNTLINT SIMTLGVVFV TGLSALTVSL 
LKSFIPRKVR MIAQTLIISF YVIIVDIVLR AYVPDVSRAL GPYVGLIITN CIIMGRTEAF 
AQSNPPLLSL WDGLTSGIGY MYVLLMVAFV RELLGFGTVF GFQVLPDNFV NWTIMVMPPS 
AFFMLAIFIW ILKGYQFRKE VKK