Gene Pmob_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_0060 
Symbol 
ID5756799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp55067 
End bp56134 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content34% 
IMG OID641301261 
ProductLacI family transcription regulator 
Protein accessionYP_001567132 
Protein GI160901551 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0425291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCCCTTA ATGTAGGGCT GAAGCTCCGC TATATATATA ATTATGATTC CGAGGTGAAT 
ATTGTGAAAG AGAAAAAGAG AAATCCAAAT CCCACTATTA AAGACGTAGC ACGACTCGCC
AACGTTGGAA TAGCAACAGT TTCAAGGGTA TTAAATAATT CCGAAAAGGT AAGCGAAAAG
ACAAAAGAGA AAGTTCTAGA AATCATAGAA GAGTTGGGAT ATTCTCCCAA CATTAACGCT
AGAACATTAT CTTCAAAAAA TATAAATTCT CTTTCTTTTG TAACACCAGA CATGGGAAAC
GAATTTTATG GAATCATGTA TTCTCTACTT GAAAAGAAAA TTTCTCGAAA TAATTATAGG
TTGATTGTTT TTCCCCTCAT AGATCAGATA TCTCTGGAAA AGATTAAGCA AAATACTGAT
CTAATTTATC AAACCGATGG TGTGTTTATC TCTTCTCTTT CCGTTTCAAG TATTTTTCAT
AACAGAATTC CCCCTAAGAA AATAATATTG ATCGATTCAT ATGATGAGAG ATTCGATTCT
GTTTACGTTG ATAATTATCA AGTCGGGAAA ACAGCCGCTC AATATCTCAT AAATAATTCA
CCTGCAAATA GTACTTTCTA TTTAGTTACT TTTAAGGAGC TCAACAATGA ATTTACCTCT
TTCGTCTTCA AAAAAAGAGA CGAAGGTTTT TTAGAAGTTA TGGAAGAGAA CAATAAAAAG
GTAAAGATTA TATATAGCGA TTTATTGTGG GATGGGGGGT ATAAAGCGAT TGGAACCCTT
ATAAAAAGGC GCCCCAGAAA ATATTCATCC ATTTTTGCAA CATGTGACAT GATTGGAGTA
GGTGTCAAAA AATACTTGGA AGAAATGAAT ATGTATCCAA AAAAGGATTA TTCATTGATA
GCTGTTGACA ATCTTCCTAT TAGTAGGCTA TTTCAATTAA CAACGATTAG ACAACCGATT
AGCGAAATGG TCGAAATTGC TTATGAGATG TTCGTCTCTT CCATGGAAGG AAGAGAAAAA
GCTGAACATT ACAAATTGGA AGCCAAAATA GTAGAAAGAG AAACATAG
 
Protein sequence
MPLNVGLKLR YIYNYDSEVN IVKEKKRNPN PTIKDVARLA NVGIATVSRV LNNSEKVSEK 
TKEKVLEIIE ELGYSPNINA RTLSSKNINS LSFVTPDMGN EFYGIMYSLL EKKISRNNYR
LIVFPLIDQI SLEKIKQNTD LIYQTDGVFI SSLSVSSIFH NRIPPKKIIL IDSYDERFDS
VYVDNYQVGK TAAQYLINNS PANSTFYLVT FKELNNEFTS FVFKKRDEGF LEVMEENNKK
VKIIYSDLLW DGGYKAIGTL IKRRPRKYSS IFATCDMIGV GVKKYLEEMN MYPKKDYSLI
AVDNLPISRL FQLTTIRQPI SEMVEIAYEM FVSSMEGREK AEHYKLEAKI VERET