Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmob_0060 |
Symbol | |
ID | 5756799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Petrotoga mobilis SJ95 |
Kingdom | Bacteria |
Replicon accession | NC_010003 |
Strand | + |
Start bp | 55067 |
End bp | 56134 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641301261 |
Product | LacI family transcription regulator |
Protein accession | YP_001567132 |
Protein GI | 160901551 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0425291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCCCTTA ATGTAGGGCT GAAGCTCCGC TATATATATA ATTATGATTC CGAGGTGAAT ATTGTGAAAG AGAAAAAGAG AAATCCAAAT CCCACTATTA AAGACGTAGC ACGACTCGCC AACGTTGGAA TAGCAACAGT TTCAAGGGTA TTAAATAATT CCGAAAAGGT AAGCGAAAAG ACAAAAGAGA AAGTTCTAGA AATCATAGAA GAGTTGGGAT ATTCTCCCAA CATTAACGCT AGAACATTAT CTTCAAAAAA TATAAATTCT CTTTCTTTTG TAACACCAGA CATGGGAAAC GAATTTTATG GAATCATGTA TTCTCTACTT GAAAAGAAAA TTTCTCGAAA TAATTATAGG TTGATTGTTT TTCCCCTCAT AGATCAGATA TCTCTGGAAA AGATTAAGCA AAATACTGAT CTAATTTATC AAACCGATGG TGTGTTTATC TCTTCTCTTT CCGTTTCAAG TATTTTTCAT AACAGAATTC CCCCTAAGAA AATAATATTG ATCGATTCAT ATGATGAGAG ATTCGATTCT GTTTACGTTG ATAATTATCA AGTCGGGAAA ACAGCCGCTC AATATCTCAT AAATAATTCA CCTGCAAATA GTACTTTCTA TTTAGTTACT TTTAAGGAGC TCAACAATGA ATTTACCTCT TTCGTCTTCA AAAAAAGAGA CGAAGGTTTT TTAGAAGTTA TGGAAGAGAA CAATAAAAAG GTAAAGATTA TATATAGCGA TTTATTGTGG GATGGGGGGT ATAAAGCGAT TGGAACCCTT ATAAAAAGGC GCCCCAGAAA ATATTCATCC ATTTTTGCAA CATGTGACAT GATTGGAGTA GGTGTCAAAA AATACTTGGA AGAAATGAAT ATGTATCCAA AAAAGGATTA TTCATTGATA GCTGTTGACA ATCTTCCTAT TAGTAGGCTA TTTCAATTAA CAACGATTAG ACAACCGATT AGCGAAATGG TCGAAATTGC TTATGAGATG TTCGTCTCTT CCATGGAAGG AAGAGAAAAA GCTGAACATT ACAAATTGGA AGCCAAAATA GTAGAAAGAG AAACATAG
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Protein sequence | MPLNVGLKLR YIYNYDSEVN IVKEKKRNPN PTIKDVARLA NVGIATVSRV LNNSEKVSEK TKEKVLEIIE ELGYSPNINA RTLSSKNINS LSFVTPDMGN EFYGIMYSLL EKKISRNNYR LIVFPLIDQI SLEKIKQNTD LIYQTDGVFI SSLSVSSIFH NRIPPKKIIL IDSYDERFDS VYVDNYQVGK TAAQYLINNS PANSTFYLVT FKELNNEFTS FVFKKRDEGF LEVMEENNKK VKIIYSDLLW DGGYKAIGTL IKRRPRKYSS IFATCDMIGV GVKKYLEEMN MYPKKDYSLI AVDNLPISRL FQLTTIRQPI SEMVEIAYEM FVSSMEGREK AEHYKLEAKI VERET
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