| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0049 |
|---|
| Symbol | |
|---|
| ID | 5756741 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 44757 |
|---|
| End bp | 45293 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641301250 |
|---|
| Product | peptide deformylase |
|---|
| Protein accession | YP_001567121 |
|---|
| Protein GI | 160901540 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
|---|
| TIGRFAM ID | [TIGR00079] peptide deformylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.84969 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATTA GACTTATTGG GGACCCTGTT TTAAGAAAAA GGGCAAAAAA AGTGGAAAAT
TTCGATGACA ATTTAAAAGA TGTCGTTGAT GAGATGTTTT CTACAATGTA TCTATACGAT
GGAGTAGGTT TAGCTGCACC TCAAGTGGGA ATATCTTTGA GGTTTTTCAT CATGGATTCT
CGGGAAGAAA ATGAAAAGGG CAAAAAAGTT GTTATTAATC CCGAAATAAT AGAGTTCTTA
GGAGAAGAGG TTAGCTTTGA AGAAGGATGC CTAAGCATTC CTGATATATT TGAAGATGTT
GTTAGACCTG AAGGTGTGAG GGTGCGTTAT CAGGATTTAA GTGGCAACGT TATAGAGGAA
GAACTTCACG GGTATCAGGC AAGAATATTT CAACATGAAA CAGATCACCT TGAGGGAATT
CTATTCACTG ACAAATTACC CATTGTAAAG AAAGCCAGGT TAAAAAAGGA ATTGAACCAA
CTAATAGAAA AGGGCAAAAA ACGTGCATGG GAGTTAGGTG AAACGGTAAA AACATGA
|
|---|
| Protein sequence | MEIRLIGDPV LRKRAKKVEN FDDNLKDVVD EMFSTMYLYD GVGLAAPQVG ISLRFFIMDS
REENEKGKKV VINPEIIEFL GEEVSFEEGC LSIPDIFEDV VRPEGVRVRY QDLSGNVIEE
ELHGYQARIF QHETDHLEGI LFTDKLPIVK KARLKKELNQ LIEKGKKRAW ELGETVKT
|
|---|
| |