| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_6051 |
|---|
| Symbol | |
|---|
| ID | 5751688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 6759595 |
|---|
| End bp | 6760596 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641301193 |
|---|
| Product | KpsF/GutQ family protein |
|---|
| Protein accession | YP_001567064 |
|---|
| Protein GI | 160901482 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
|---|
| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCTG ATGCTGCCAC CCTGGATGCG CTGGACACGC CCCGTGCCCT GCGCCTGGCC
CGCGACACCC TGGGCATCGA GGCCGATGCC CTTCAAGCCA TGTCGCAGCG CCTTGATGGC
GTGTTCGGCG AAGTGGTGCA GCGCATCCTG CGGCTGTCCG GCCGCGTCGT CGTGATGGGC
ATGGGCAAGA GCGGCCATGT CGGGCGCAAG GTGGCCGCCA CCCTGGCTTC CACGGGCACG
CCTGCGTTCT TCGTGCATCC GGCCGAGGCC AGCCATGGCG ATCTGGGCAT GGTGACCGGC
ATCGACCTGG TGCTGGCGCT GTCCAACAGC GGCGAGGCCG ATGAGCTCGC TGCGCTGCTG
CCGGCCATCA AGCGCCAGGG CATTGCTCTG GTGGCCATGA CAGGCGGCGC GCAATCCACG
CTGGCCCGCC ATGCCGACTG GGTGCTGAAC ACCCGTGTCG AGCGCGAGGC CTGCCCCCTG
AACCTGGCGC CCACGGCCAG CACCACGGCG CAGATGGCCA TGGGCGACGC CCTGGCCGTG
GCCCTGCTCG ATGCGCGCGG CTTTGGCGCC GAGGACTTTG CGCGCTCCCA TCCGGGCGGC
GCGCTGGGCC GCAAGCTGCT GACCCATGTG CGTGATGTCA TGCGCAGCGG CGATGAACTG
CCGAAGGTCG GGGCCGATGC CAGCTTTGTC GAACTGATGC GCGAGATGAG CGCCAAGGGC
CTGGGCTGCT CGGCCATCGT CGATGCGGCA GGCGTGCTGC AGGGCATCTT CACCGACGGA
GACCTGCGCC GCCGCGTGGA GGCCGGCACC GACCTGCGCG CGCTGCAGGC CGGCGATGTC
ATGCACAAGG GGCCCCGCAC CATCGCCGAA GACGCGCTGG CCGTGGACGC CGCCAGCATG
ATGGAGGAGC ACGGCATCAC CGCGGTGCTG GTGGCCGATG CGCAGCGCCA GCTGCGCGGC
GTGGTCCATA TCCGCGACCT GATGCGCGCC AAGGTGATCT GA
|
|---|
| Protein sequence | MNSDAATLDA LDTPRALRLA RDTLGIEADA LQAMSQRLDG VFGEVVQRIL RLSGRVVVMG
MGKSGHVGRK VAATLASTGT PAFFVHPAEA SHGDLGMVTG IDLVLALSNS GEADELAALL
PAIKRQGIAL VAMTGGAQST LARHADWVLN TRVEREACPL NLAPTASTTA QMAMGDALAV
ALLDARGFGA EDFARSHPGG ALGRKLLTHV RDVMRSGDEL PKVGADASFV ELMREMSAKG
LGCSAIVDAA GVLQGIFTDG DLRRRVEAGT DLRALQAGDV MHKGPRTIAE DALAVDAASM
MEEHGITAVL VADAQRQLRG VVHIRDLMRA KVI
|
|---|
| |