Gene Daci_6048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_6048 
Symbol 
ID5751679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6757578 
End bp6758378 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content62% 
IMG OID641301190 
Productshort chain dehydrogenase 
Protein accessionYP_001567061 
Protein GI160901479 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.549002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAT CCTCGCGCAG CCCGGCACCC CTGGCCTTCA TCACCGGCGC ATCCAGCGGC 
ATAGGCCAGG CCCTGGCCTG GCATGCCTAC CAGCAAGGCT GGTCGCTGGC ACTGGTTGCC
CGGCGTGGCG ACGTGATGGC GCAATGGGCT GCGCAGCAGG GCCTGGAGGC GTCGCGCTTC
GCCATCTACG AGGCCGATGT GGCCGCGCCC GACAGCATCA TCGCTGCCGC CCGGCGCTGT
GAGCAGCAGC AGGGCCTGCC CGATGTCGTG ATTGCCAATG CCGGCGTCAG CTGGGGTGTG
GACACCTCGA TGCGCGAGGA TATCGACACC ATGCAGCAGG TGCTGGCCGT CAACACCATG
GGCGTGGCGG CCAGTTTCCA TCCCTTTATC GCGCCCATGG TGCAGCGTGG CAGCGGGCAG
TTGGTCGGTA TCGCCAGCGT GGCCGGGCTG CGCGGCCTGC CGGGACATGG TGCTTATTGC
GCCAGCAAGG CTGCAGTCAT TGCCTATTGC GAAAGCCTTC GCGGTGAATT GCGCAGTAGT
GGCGTAAAAG TCACTACATT GCTTCCTGGT TATGTAGATA CACCCCTCAC ACGCGGTAAC
CGCTATGGCA TGCCATTCCT ATTGCAGCCC CATGAGTTTG CTGCAAGGGC CTGGCGTTCC
ATTGATGCCG GGCGCAGCCT GGCCATCATC CCCTGGCAAA TGGCGTGGGT TGGCCGTTTG
ATGAAAATTC TGCCAAACCC CTTGTTTGAT CGGCTGCTTG TAGGACGAAA GCGCAAACAT
CGTCATTCGA AAAATCCCTG A
 
Protein sequence
MTTSSRSPAP LAFITGASSG IGQALAWHAY QQGWSLALVA RRGDVMAQWA AQQGLEASRF 
AIYEADVAAP DSIIAAARRC EQQQGLPDVV IANAGVSWGV DTSMREDIDT MQQVLAVNTM
GVAASFHPFI APMVQRGSGQ LVGIASVAGL RGLPGHGAYC ASKAAVIAYC ESLRGELRSS
GVKVTTLLPG YVDTPLTRGN RYGMPFLLQP HEFAARAWRS IDAGRSLAII PWQMAWVGRL
MKILPNPLFD RLLVGRKRKH RHSKNP