Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_6048 |
Symbol | |
ID | 5751679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 6757578 |
End bp | 6758378 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641301190 |
Product | short chain dehydrogenase |
Protein accession | YP_001567061 |
Protein GI | 160901479 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.549002 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGACAT CCTCGCGCAG CCCGGCACCC CTGGCCTTCA TCACCGGCGC ATCCAGCGGC ATAGGCCAGG CCCTGGCCTG GCATGCCTAC CAGCAAGGCT GGTCGCTGGC ACTGGTTGCC CGGCGTGGCG ACGTGATGGC GCAATGGGCT GCGCAGCAGG GCCTGGAGGC GTCGCGCTTC GCCATCTACG AGGCCGATGT GGCCGCGCCC GACAGCATCA TCGCTGCCGC CCGGCGCTGT GAGCAGCAGC AGGGCCTGCC CGATGTCGTG ATTGCCAATG CCGGCGTCAG CTGGGGTGTG GACACCTCGA TGCGCGAGGA TATCGACACC ATGCAGCAGG TGCTGGCCGT CAACACCATG GGCGTGGCGG CCAGTTTCCA TCCCTTTATC GCGCCCATGG TGCAGCGTGG CAGCGGGCAG TTGGTCGGTA TCGCCAGCGT GGCCGGGCTG CGCGGCCTGC CGGGACATGG TGCTTATTGC GCCAGCAAGG CTGCAGTCAT TGCCTATTGC GAAAGCCTTC GCGGTGAATT GCGCAGTAGT GGCGTAAAAG TCACTACATT GCTTCCTGGT TATGTAGATA CACCCCTCAC ACGCGGTAAC CGCTATGGCA TGCCATTCCT ATTGCAGCCC CATGAGTTTG CTGCAAGGGC CTGGCGTTCC ATTGATGCCG GGCGCAGCCT GGCCATCATC CCCTGGCAAA TGGCGTGGGT TGGCCGTTTG ATGAAAATTC TGCCAAACCC CTTGTTTGAT CGGCTGCTTG TAGGACGAAA GCGCAAACAT CGTCATTCGA AAAATCCCTG A
|
Protein sequence | MTTSSRSPAP LAFITGASSG IGQALAWHAY QQGWSLALVA RRGDVMAQWA AQQGLEASRF AIYEADVAAP DSIIAAARRC EQQQGLPDVV IANAGVSWGV DTSMREDIDT MQQVLAVNTM GVAASFHPFI APMVQRGSGQ LVGIASVAGL RGLPGHGAYC ASKAAVIAYC ESLRGELRSS GVKVTTLLPG YVDTPLTRGN RYGMPFLLQP HEFAARAWRS IDAGRSLAII PWQMAWVGRL MKILPNPLFD RLLVGRKRKH RHSKNP
|
| |