| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5955 |
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| Symbol | |
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| ID | 5751576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6642379 |
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| End bp | 6644061 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641301087 |
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| Product | general substrate transporter |
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| Protein accession | YP_001566968 |
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| Protein GI | 160901386 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATCA ACGCATCGCA AGGCGCGGGG GTCAAGGCGA CCCCGCGGCC CATGACTCCG
GAAGAACGCA AGGTGATCTT TGCCTCGTCG CTAGGCACGG TTTTCGAGTG GTACGACTTC
TATCTCTACG GATCGCTGGC GGCCATCATC GCCAAGCAAT TCTTCAGCGG GCTCGATGCG
GGATCGGCCT TCATCTTCGC GCTGCTGGCC TTCGCGGCCG GCTTCATCGT GCGGCCCTTC
GGCGCACTGG TGTTCGGGCG GCTGGGCGAC ATGATCGGGC GCAAGTACAC CTTCCTCGTG
ACCATCCTGA TCATGGGCCT GTCGACCTTC ATCGTCGGCA TCCTGCCCAC CTACGCCAGC
ATCGGCGTGG CGGCGCCGGT GATCCTCATC GGCCTGCGCA TGCTGCAGGG CCTGGCCCTG
GGCGGCGAGT ACGGCGGTGC GGCCACCTAC GTGGCCGAGC ATGCGCCGCA CGGCAAGCGC
GGCGCCTACA CCTCGTGGAT ACAGACCACG GCAACGCTGG GCCTGTTCCT GTCGTTGCTG
GTGATCCTGG GCGTGCGCAC CTCCATCGGC GAGCAGGCCT TTGCGGACTG GGGCTGGCGC
ATCCCCTTCC TGCTGTCCAT CGTGCTGCTG GGTATCTCGG TGTGGATCCG CATGACGCTG
TCCGAGTCGC CGGCCTTCCA GAAGATGAAG GCCGAGGGCA AGGTCTCCAA GTCCCCGCTG
ACCGAGTCCT TCGGCCAATG GCGCAACCTC AAGATCGTGA TCCTGGCGCT GATCGGCCTG
ACCGCCGGCC AGGCCGTGGT CTGGTACACG GGGCAGTTCT ATGCGCTGTT CTTCCTGACG
CAGCAGCTCA AGGTCGATGC GGTGACGGCC AACCTCATGA TCGCGGCGGC GCTGATCATC
GGCACGCCGT TCTTCGTGAT CTTCGGCTCG CTGTCCGACA AGATAGGCCG CAAGCCCATC
ATCATGCTGG GCTGCGTGCT GGCCGTGGTG ACCTACTTCC CCGTGTTCAA GGCGCTGACC
GAAGCGGCCA ACCCCGACCT GGCTGCGGCA CAGGCCAAGA ACAAGGTGGT CATCGTCGCC
GATCCCAAGG AATGCTCGTT CCAGTTCAAT CCCACGGGCA CCTCCAAGTT CACCAGCTCC
TGCGACGTGG CCAAGCAGTT GCTGGCCGCA GGCTCGGTCA GCTATGACTC CGAGGACGCA
GCGCCCGGCA AGACGGCCTT CATCCGCATC GGCAGCACCG AGATCCCCTC GTTCTCCATC
AAGGGCCTGA GCCCCGAGGA AGCCAAGGCC AAGGACGCCG AGTTCAAGAA GACCGTGGCC
AAGGTGCTGG CCGAGGACGG CTATCCCACC AAGGCCGACC CCGCGAAGAT GAACAAGGTC
ATGATGGTCG CCATCCTGAC CTACCTGGTC ATCCTCGTGA CCATGGTCTA CGGGCCCATC
GCCGCCATGC TGGTGGAGCT GTTCCCCACG CGCATCCGCT ATACCTCCAT GAGCCTGCCG
TACCACATCG GCAATGGATG GTTCGGCGGC CTGCTGCCCA CCATGTCCTT CGCCATCGTG
GCCCAGACCG GCAATATGTA CAGCGGCCTC TGGTACCCCA TCGTCATTGC AGGCGCCACG
GCCATCATCG GCACGCTGTT CCTGCGCGAG ACCAAGGATG TGGATATCTA CGCTAATGAT
TGA
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| Protein sequence | MAINASQGAG VKATPRPMTP EERKVIFASS LGTVFEWYDF YLYGSLAAII AKQFFSGLDA
GSAFIFALLA FAAGFIVRPF GALVFGRLGD MIGRKYTFLV TILIMGLSTF IVGILPTYAS
IGVAAPVILI GLRMLQGLAL GGEYGGAATY VAEHAPHGKR GAYTSWIQTT ATLGLFLSLL
VILGVRTSIG EQAFADWGWR IPFLLSIVLL GISVWIRMTL SESPAFQKMK AEGKVSKSPL
TESFGQWRNL KIVILALIGL TAGQAVVWYT GQFYALFFLT QQLKVDAVTA NLMIAAALII
GTPFFVIFGS LSDKIGRKPI IMLGCVLAVV TYFPVFKALT EAANPDLAAA QAKNKVVIVA
DPKECSFQFN PTGTSKFTSS CDVAKQLLAA GSVSYDSEDA APGKTAFIRI GSTEIPSFSI
KGLSPEEAKA KDAEFKKTVA KVLAEDGYPT KADPAKMNKV MMVAILTYLV ILVTMVYGPI
AAMLVELFPT RIRYTSMSLP YHIGNGWFGG LLPTMSFAIV AQTGNMYSGL WYPIVIAGAT
AIIGTLFLRE TKDVDIYAND
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