| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5941 |
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| Symbol | putA |
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| ID | 5751562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6618224 |
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| End bp | 6622261 |
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| Gene Length | 4038 bp |
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| Protein Length | 1345 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641301073 |
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| Product | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_001566954 |
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| Protein GI | 160901372 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
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| TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCA CCGTAGGCAT CAAGGTTGAT GACGCTCTGC GCGAGCGTAT CCGCATCGCC
GCCCAGCAGA TAGGGCGCAC ACCGCACTGG CTGATCAAGC AGGCGGTTGT CCAGTACGTC
GATGCCCTGG AGCGCGGCGC GACCACCATC CGGCTGTCCA GCGCGGGCGA CAGCCAGGGC
GATGTGGCGC TGGAAGAAGC GCAACCCAGC AGCCCGCAAG AGGTGCAACC TTTTCTGGAA
TTCGCCCAGT CCATCCTGCC GCAGACGCCG TTGCGCGCTG CCATCACGGC CGCCTGGCAC
CGGCCCGAGC CCGAGTGCCT GCCGGTGCTG CTGCCGCTGG CACGCGCCCA GGATGCCCAG
CAGGCCGACA AGGTGCGCGA GCTGGCGACC CGGCTGGTGC AGGGCCTGCG CGATGCGCCG
GCCGGCAGCG GCGTGGCGGC GCTGGTGCAG GAGTTCTCGC TGTCCAGCCA GGAAGGCGTG
GCGCTGATGT GCCTGGCCGA GGCGCTGCTG CGCATTCCCG ACCGTGCCAC GCGCGATGCG
CTGATCCGCG ACAAGATCAG CAAGGGCGAC TGGCGCGCCC ATGTGGGCCG CTCGCCCTCG
CTGTTCGTGA ACGCGGCGGC CTGGGGCCTG GTGCTGACGG GCAAGCTCAC GTCCACCAGC
AGCGAAAAGA ACCTGTCGTC GGCGCTGACG CGCGTGATCG GCAAGGGCGG CGAGCCGCTG
ATCCGCCAGG GCGTACACCG CGCCATGAAG CTGATGGGCG AGCAGTTCGT GACGGGCCAG
GACATTGCCG AGGCGCTGGC CAACAGCCGC GCCTATGAAA AACAGGGCTT TCGCTACAGC
TACGACATGC TGGGCGAGGC GGCCGCCACC GATTCCGACG CACAGCGCTA CCTGCAGGCC
TACGAGCAGG CCATCCACGC GATTGGCGCG GCCTCCAACG GACGCGGCAT CTTCGAGGGG
CCTGGCATCT CCATCAAGCT GTCGGCCCTG CACCCGCGCT ACAGCCGCGC GCAGTACGAG
CGCGTGATGG CCGAACTGCT GCCGCGCGTG CTGCAGCTGG CCGAGCTGGC CAAGCAGTAC
GACATCGGCA TGAACATCGA CGCCGAAGAG GCCGACCGGC TGGAGCTGTC GCTGGACCTG
CTGGAGGCCT TGTGTGCCGC GCCCTCGCTC AAGGGCTGGA ACGGCATAGG CTTTGTGGTC
CAGGCCTACC AGAAGCGCTG CCCGCAGGTG CTGGACTACC TGGTGGACCT GGCCCGCCGC
AGCCGCCGCC GCCTGATGGT GCGCCTGGTC AAGGGCGCCT ACTGGGACAG CGAGATCAAG
CGCGCCCAGG AAGGCGGCCA GGCCGGCTAC CCGGTCTATA CGCGCAAGGT CTATACCGAT
GTGAGCTACC TGGCCTGCGC GCGCAAGCTG CTGGATGCGC CCGATGCCAT CTACCCCCAG
TTCGCCACGC ACAACGCGCA GACCCTGGCC AGCATCTACC ACCTGGCCCA GGCCGTGGGC
GGCAGCTACT ACAGCGGCCA GTACGAGTTC CAGTGCCTGC ACGGCATGGG CGAGCCCCTG
TACGCACAGG TGACGGGCCC GGCCTCCGAA GGCAAGCTGG CCCGCCCCTG CCGCATCTAT
GCGCCCGTGG GCAGCCATGA GACGCTGCTG GCCTATCTGG TGCGCCGCCT GCTGGAGAAC
GGTGCCAATA CCTCGTTCGT GAACCGCATC GGCGATGCCT CCGTGCCGGT CTCCGACCTG
GTGGCCGACC CGGTGGACGA GGTGATGAAG ATCGCGCGCA ACGAAGGCCG GCTGGGCGCC
CCCCACCCGC GCATTGCGCT GCCGGCCGAT CTGTTCGCGC AGCAGGGAGA CAAGCCAGGG
CAGGCCCGCG CCAACTCCCA GGGCCTGAAC CTGGCGCACG AGCAGCAGCT GGCCTCGCTG
GCCGCCGCGC TGCTGCACAG CACGCGCCAG ACCTATCTGG CCGCCCCCGC GGATGCCGAC
CTGCCGGCCG ACCCGGCACG TACCGAAGGC TGGCAGCCCA TGCGCAACCC GGCCGAGCTG
TCCGACATCG TGGGCTGGGT GCGCGAGGCC ACGGCGGCCG AGGCCGAAGC CGCCGCCGCG
CGCGCCGCGC AGGCCGCGCC CATCTGGGCC GGCACACCGC CCGCCGCCCG TGCCGACGCG
CTGGCCCGCG CCGCCGACCT GCTGGAGCAA CGCAGCCAGC CGCTGATGGG CCTGATCATG
CGGGAGGCGG GCAAGACCCT TTCCAACGCC GTGGCCGAGG TCCGCGAGGC CGTGGACTTC
CTGCGCTACT ACGGCGCCCA GGCGGCCGCG CATTTCGACA ACGCCGCGCA GCGCCCGCTG
GGCGTGGTGC TGGCCATCAG TCCCTGGAAT TTCCCCCTGG CCATCTTCTG CGGACAGGTG
GCTGCGGCCC TGGCCGCCGG CAACACGGTG CTGGCCAAGC CTGCCGAGCA GACACCGCTG
ACGGCCGCCG CCATGGTGGC CCTGCTGCAC GAGGCTGGCG TGCCGCGCGA CGCGCTGCAG
CTGGTGCCGG GCACGGGCGA GACCGTGGGC GCGGCCCTGG TGGCCCATGC CCAGGTGGCG
GGCGTGATGT TCACGGGTTC CACCGAGGTG GCGCGCCTGA TTGCACGCCA GCTGTCCCGC
CGCCTGTCGC CTGCGGGCCG CACCATTCCG CTGATTGCCG AGACCGGCGG CCAGAACGCC
ATGGTGGTGG ACTCCTCGGC CCTGGCCGAG CAGGTGGTGG CCGATGTGCT GGCCTCGGCC
TTCGATTCGG CCGGCCAGCG CTGCTCTGCC CTGCGCCTGC TGTGCCTGCA GGACGAGGTG
GCCGACCGCA CGCTGACCAT GCTGCGCGAT GCGCTGCAGG AGTGGAACCT GGGCAACCCC
GACCGCCTGA GCACCGATGT GGGCCCCGTG ATCGACGATG CGGCGCGCCG CCAGATCGAG
CAGCACATAG AGCAGATGGC CGCGGCGGGC CAGAAGGTCA CCCGCGTGGA ACGCAAGGAC
GGCGTGCTCA ACGGCCACTA CGTGGCCCCG GCGCTCATCG AGATCGACAG CACCACGCGC
CTGCAGCGCG AGGTCTTCGG CCCCGTGCTG CATGTGATCC GCTTCAAGCG CGAGCAGCTG
GACGCGCTGG TCGATGGCAT CAACGCCACC GGCTACGGCC TGACCTTCGG CGTGCACAGC
CGCATCGACG AGACCATTGC CCACCTCACC CAGCGCGTGC ATGCGGGCAA CATCTATGTG
AACCGCAATG TGATCGGCGC CATGGTGGGC GTGCAGCCCT TCGGCGGCAT GGGCCTGTCC
GGCACCGGCC CCAAGGCCGG CGGCCCGCTG TACCTGCACC GGCTGGCGCA GGGGCCGGCC
AGCGCGGCGC TGTCCGTCTT TGCGCGGGCC GAGTCGTCCG CCCAGGCACC GCTGCAATTG
CTGGGCCTGC TGCGCGAGAC GCTGTCCAAG GCACCGCCCC AGGACATGTC CGCCGATGAG
CAGGTGCAGG CCCTGGCCGC CTGCGACGAG GCCCTGGCCG CCTCGCGCCT GGACGCCGCC
ATGCTGCTGC CCGGCCCCAC GGGCGAATCC AACCGCTACC GCCTGCTGCC GCGCGGCCCC
GTCTGGGCAT TGCCGCGCAC GCCGCTGGGC CTGGTGGCCC AGGTGGCAGC AGCCCTGGCC
AGCGGCAACG CCTGCCATGC CGTGCTGCCC GACAACGGAA CAGGCGCCGA CAGCGGCTGC
GCCGCCACCT GGCAGGCGCT GCGCGCCGCT GCGGGCGATG CCGGTGTGCC ATGGCTGCAC
AGCGCCAGCG CCGAATCGCT GGCTGATGCA CAAGCGCCCA TGGCGGCCTT GCTGTTCGAG
GGCGACGGCG ACGCCCTGCT GCAGGTCTGC GCCCAGGTCG CCGCGCGAGA CGGTGCCCTG
GTGCGCGTGG AAAGCCGCAA CAGCGACGAG CTGCATGCGG GCCGCGGCTA TGACCTGGCC
GCGCTGTTCC ACGAGCAATC CATCAGCACC AATACCGCCG CCGCAGGCGG CAATGCACAG
CTCATGACCA TGGCTTGA
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| Protein sequence | MSTTVGIKVD DALRERIRIA AQQIGRTPHW LIKQAVVQYV DALERGATTI RLSSAGDSQG
DVALEEAQPS SPQEVQPFLE FAQSILPQTP LRAAITAAWH RPEPECLPVL LPLARAQDAQ
QADKVRELAT RLVQGLRDAP AGSGVAALVQ EFSLSSQEGV ALMCLAEALL RIPDRATRDA
LIRDKISKGD WRAHVGRSPS LFVNAAAWGL VLTGKLTSTS SEKNLSSALT RVIGKGGEPL
IRQGVHRAMK LMGEQFVTGQ DIAEALANSR AYEKQGFRYS YDMLGEAAAT DSDAQRYLQA
YEQAIHAIGA ASNGRGIFEG PGISIKLSAL HPRYSRAQYE RVMAELLPRV LQLAELAKQY
DIGMNIDAEE ADRLELSLDL LEALCAAPSL KGWNGIGFVV QAYQKRCPQV LDYLVDLARR
SRRRLMVRLV KGAYWDSEIK RAQEGGQAGY PVYTRKVYTD VSYLACARKL LDAPDAIYPQ
FATHNAQTLA SIYHLAQAVG GSYYSGQYEF QCLHGMGEPL YAQVTGPASE GKLARPCRIY
APVGSHETLL AYLVRRLLEN GANTSFVNRI GDASVPVSDL VADPVDEVMK IARNEGRLGA
PHPRIALPAD LFAQQGDKPG QARANSQGLN LAHEQQLASL AAALLHSTRQ TYLAAPADAD
LPADPARTEG WQPMRNPAEL SDIVGWVREA TAAEAEAAAA RAAQAAPIWA GTPPAARADA
LARAADLLEQ RSQPLMGLIM REAGKTLSNA VAEVREAVDF LRYYGAQAAA HFDNAAQRPL
GVVLAISPWN FPLAIFCGQV AAALAAGNTV LAKPAEQTPL TAAAMVALLH EAGVPRDALQ
LVPGTGETVG AALVAHAQVA GVMFTGSTEV ARLIARQLSR RLSPAGRTIP LIAETGGQNA
MVVDSSALAE QVVADVLASA FDSAGQRCSA LRLLCLQDEV ADRTLTMLRD ALQEWNLGNP
DRLSTDVGPV IDDAARRQIE QHIEQMAAAG QKVTRVERKD GVLNGHYVAP ALIEIDSTTR
LQREVFGPVL HVIRFKREQL DALVDGINAT GYGLTFGVHS RIDETIAHLT QRVHAGNIYV
NRNVIGAMVG VQPFGGMGLS GTGPKAGGPL YLHRLAQGPA SAALSVFARA ESSAQAPLQL
LGLLRETLSK APPQDMSADE QVQALAACDE ALAASRLDAA MLLPGPTGES NRYRLLPRGP
VWALPRTPLG LVAQVAAALA SGNACHAVLP DNGTGADSGC AATWQALRAA AGDAGVPWLH
SASAESLADA QAPMAALLFE GDGDALLQVC AQVAARDGAL VRVESRNSDE LHAGRGYDLA
ALFHEQSIST NTAAAGGNAQ LMTMA
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