Gene Daci_5932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5932 
Symbol 
ID5751553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6604508 
End bp6605305 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content68% 
IMG OID641301064 
ProductHAD family hydrolase 
Protein accessionYP_001566945 
Protein GI160901363 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTACAA CCCTCCAGCC GCTGTCCCTC TGGACACCTC CCGCATCGCC GCTCGGCATC 
CTCACCGACA TCGACGACAC CCTGACCACC GAGGGTGTGG TGCCGGACCA TGTCGTCGAT
GCCATCGCCC GGCTCAAGCA GTCCGGCCTG CGCGTGGTGC CGATCACGGG CAGGCCCGTG
GGCTGGAGCG AGCCCTTTGC CCAGGCCTGG CCCGTGGATG CCATCGTGGC CGAGAACGGC
GCCGTGGCAC TGCGGCGCAA TGCGCAGGGC GGGCTGGACA AGCTCTACCA GCAGGACGAG
GCCACACGCA CCGCCAACTA CGCGCGCATG CAGCAGGTGC TGGCCGAGAT CGAGGCCACC
GTGCCCGGAG CGCTGCGCGC CACCGACTCG GCGGGCCGCG AATGCGACAT TGCCGTGGAT
CACAGCGAAT TCACCCAGAT GCCCCAGCAG GACATCGACC GCTGCGTGGC CATCATGAAG
GCGGCGGGCA TGAACGCCAC CGTCAGCTCC ATCCACATCA ACGGCTGGTT CGGAGCGCAC
AACAAGCTCG AAGGCGCACG CTGGATCCTG CGCACGCTGT TCGACATCGA CCTCGACGCC
ACGCTGGACC GCTGGATCTA CATCGGCGAC TCCACCAACG ACCAGCTCAT GTTCGAGCAC
ATGCCCCACA GCGTGGGCGT GGCCAACATC GCGCGCTTCG TGCCCCAGCT CAAGCACCTG
CCTCGCCACG TCACCCGGGC CGAGCGTGGA GACGGCTTTG CCGAAATGGC GCAGTACCTG
CTGACCCAGC GCCCCTGA
 
Protein sequence
MPTTLQPLSL WTPPASPLGI LTDIDDTLTT EGVVPDHVVD AIARLKQSGL RVVPITGRPV 
GWSEPFAQAW PVDAIVAENG AVALRRNAQG GLDKLYQQDE ATRTANYARM QQVLAEIEAT
VPGALRATDS AGRECDIAVD HSEFTQMPQQ DIDRCVAIMK AAGMNATVSS IHINGWFGAH
NKLEGARWIL RTLFDIDLDA TLDRWIYIGD STNDQLMFEH MPHSVGVANI ARFVPQLKHL
PRHVTRAERG DGFAEMAQYL LTQRP