Gene Daci_5920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5920 
Symbol 
ID5751541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6586562 
End bp6587305 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content72% 
IMG OID641301052 
Producttwo component transcriptional regulator 
Protein accessionYP_001566933 
Protein GI160901351 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC CCGCCAACCG CATCCTGATG ATCGAGGACG ACCCCGGCAT CCGCCGCTTC 
GTGCGACTGG TGCTGGAAGA CGAAGGCTGG CAGGTCTTCG AGGCCGACAG CGCGCGCCGC
GGCCTGATCG AGGCGGCGAG CCGCCAGCCC GACCTGGTCA TCCTCGACCT GGGCCTGCCC
GACGCCGATG GCAAGCAGGT CCTGACCGAG CTGCGCGGGT GGTCCTCCGT GCCCGTGCTC
GTGCTCTCCG CGCGCGAGCG TGAGGACGAG AAGGTGGCCG CATTGGATGC CGGCGCCGAC
GACTACCTGG TCAAGCCCTT CGGCGTGCCC GAGCTGCTGG CCCGGCTGCG CGTGATGCTG
CGCCGCCGCC AGCAGCTGGG CGCCGCCGGT GGGGCGGGCG GCACCGCCGC GTCCAGCAAG
GTGCACTTCG GCCCGGTGCA GGTGGACCTG GCCACGCATG AGGTGCGGCG CGCGGGGCAG
CCGGTGCACC TCACGCCCAT CGAATTCCGC CTGCTGGCGG CCCTGATCGC CGCCCAGGGC
CGGGTGCTCA CCCACCGCCA GCTGCTGCTG CAGGTCTGGG GCCCCGAGTA CCTGAGCCGC
GCCCACTACC TGCGCGTGCA CATGGCCAAT CTGCGCCAGA AGATCGAGGA CGAGCCGGCC
CAGCCGCGCC ACCTGGTGAC CGAGCTGCAG GTGGGCTACC GGCTTGTGGG GCTGGGCGGT
GAGGCATCCA CGGGATCGGT ATAA
 
Protein sequence
MSTPANRILM IEDDPGIRRF VRLVLEDEGW QVFEADSARR GLIEAASRQP DLVILDLGLP 
DADGKQVLTE LRGWSSVPVL VLSAREREDE KVAALDAGAD DYLVKPFGVP ELLARLRVML
RRRQQLGAAG GAGGTAASSK VHFGPVQVDL ATHEVRRAGQ PVHLTPIEFR LLAALIAAQG
RVLTHRQLLL QVWGPEYLSR AHYLRVHMAN LRQKIEDEPA QPRHLVTELQ VGYRLVGLGG
EASTGSV