| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5892 |
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| Symbol | |
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| ID | 5751513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6549317 |
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| End bp | 6551848 |
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| Gene Length | 2532 bp |
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| Protein Length | 843 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641301024 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001566905 |
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| Protein GI | 160901323 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTCCC CTTCTTCCAC CGCCGGACCA CGCGCCAGCC TGCGCGCCAC CGCCTTGGCG
GCCCTGGCCG TCAGCACCTC GCTGCTGCTG CACGCGCTGC CAGTCCAGGC GGCCGAGCCG
GCCGCCAGCG CCGCTGCCCG GAGCTACCAG ATCCAGCCGG GTCCGCTGGG CCCGGCGCTG
ATGGCCTTTG CCGCACAGGC AGGCGTGAAC CTGGGCATGG ATCTGCAGCA GCTCGGCGGC
ATGGAGACAC GCGGCCTGTC CGGCACGTTC TCCGTGGAGG ACGGCTTTGC GCAGCTGCTG
AACACGTCAG GCTGGACAGC GCGCCGCGTG GGTGCGGGCA ACTACGCGCT GGAGAAGCTG
CCTGCGGCGG CCCGCCAGGC GCCGTCCACT GCAGCGGCCG TGCCCTCACC CTCAGCCCCG
GCCGCAGCCC CAGCCGCGGC ACAGGCCACG GAACTTGCCG CCATCACGGT GACCGCGCGC
ACGCAGAACA ACCTGGTCGC GCCCTCGCGG CAAGTGACGA TTCTGGAAGG CCAGGAGGTG
GAGCAGCTGC GCCAGGGCTC GGACAGCCTG GCCACCATGC TCAGCAAGGT GGTGCCTGGC
ATGGCAGACT CCAGCCACAC CATCACCGAC TACGGCCAGA CGCTGCGCGG CCGCAACATG
CTGGTGCTGG TGGACGGCGT TCCGCTGAAC ACCAACCGCG ACTCGTCCAG GAACCTGGCC
AACATCAACC CGGCCGACAT CGAGCAGATC GAGGTGCTGC GCGGCAGCAG CGCCATCTAC
GGCAGCGGTG CGGCGGGCGG CATTGTCTCC ATCCGCACCA AGCGGCCCTC TGGCGAGACG
CGGGCCGAGA CCATCGTCAC CGGCTCGGCC CCCCTGTCGC GCCTGCGCGG CGCGGGGCTG
GGCGGCGAGG TGCAGCACTA CCTGTCCGGC GGCGGCGAGG TGGTCGACTA CTCGGTGAGC
CTGGGCGCCA AGCACATGGG AGGCGCCTTC GACGCCAAGG GCAACCGCAT TGCGCCCGAG
CCCAGCCAGG GCGACCTGTT CGATTCCAGC ATCTACAACG CGTCGGCCAA GATCGGCTTC
AAGCTCGATG CCGACCAGCG CCTGCAATTG ACCGCCAGCC ACTACAACGC GGCCCAGGAC
ACGGACTACG CCTCCGACCC GGCGGTGGCG CGGCTGCCGG CCGGAACGGC CGCAGCCCGC
CCCATCAAGG GCCTGGTGCT GGCCGACCAG AACCAGATCC GGAACACCAT GCTGGGGCTG
GACTACGAGA ACCGGGACAT CGCAGGCAGC ACGCTGGCCG CCCAGCTCTA CTACCGGGAT
TTCTTCACGC GGTTTGCGCC CTTCGACGCA CGCGCCGTGC CGGTGCGGGG CGCCAATGTC
GATCAGTCCA TGCAGAACTC CGAGGTCTTT GGCGGGCGCC TGACACTGAA GACGCCGCTG
GGCGCCAGCA AGAAAAGCCT GCTGATCTGG GGTGCGGACT TCCACCAGGA GCGCACCGAC
ATGCCCATCG ACATCTTCGA CCCCCGGGCC TATGACGCCA GCGGCGGCCT GGTCTTCAAC
AAGACCGGCC GCCTGGTCTA CATGCCCCCG GTCACCACGC GCAGCATCGG CGCCTTCGCC
CAGCTGCAGC ACCAGTTCAG CGACCAATGG TCGGCCGAAG GCGGCCTGCG CTACGACCGC
GCCCAGGCCA GCTTCAACGA CTTCACGCCG CTGTCGCAAT CGCGGGTGCC CAACCCCCAG
TCCGTGAATG GCGGCACCGT CCAGTACAAC GCCTGGACCT ACAACCTGGG CACGGTCTTC
ACGCCGGTGA AGGGCCAGGA GTTCTATGCC TCGTACAGCC AGGGCTTCGA GCTGCCGGAC
ATCGGCGTGG TGGTGCGCAA TGCCACGCCG GCCTTCAACC TGGGCAACTC CAACCTGCAG
GCGGTCAAGA CCAACACCTA TGAAATGGGC TGGCGCGGCA AGTTCTCCAA CGTGATGGCC
AATCTCAGCG TCTTCCAGTC GCGCTCCAAC CTGGGCGCCG TGCAAAGCTT CAACAACGGC
CTGTCCCTGC TGCGCACCCG CGAGAAGATC CACGGCCTCG AAGGCGGCCT GGACTACTTC
AGCGATGACG ACCACTGGAG CGCGGGCGGC AGCTTCACCT GGATGAAGGG CCGCGAGCTG
CCCCAGGCCG CCAGCGGCTA CCAGGACATG ACGGGCTTTC GCATCCCGCC GCTTAAGCTG
ACGGCCTATG TGGAGTACCG GCCCGATGCC CGCTGGAGCC ACCGCCTGCA GGCAACCTCG
TATGCCGCCA AGGACTACCG CCTGGACGGC AAGACCGGCT TTGGCCGCTA TGACACGCGG
GGCTACACCA CGGTGGACCT GATCAGCCAG TGGAAGATCG ACCCCAAGAA CCGCGTGTCC
CTGGGCGTGG AAAACCTGTT CAACCGCCAG TACTTCCCGC TCTACAGCCA GCTGCTGCGC
AGCAACAACA ACACCAGCCG CCTGCCAGCG GCCGGCACGG TGCTGAAGAT CAGCTACGCG
CACACCTGGT GA
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| Protein sequence | MHSPSSTAGP RASLRATALA ALAVSTSLLL HALPVQAAEP AASAAARSYQ IQPGPLGPAL
MAFAAQAGVN LGMDLQQLGG METRGLSGTF SVEDGFAQLL NTSGWTARRV GAGNYALEKL
PAAARQAPST AAAVPSPSAP AAAPAAAQAT ELAAITVTAR TQNNLVAPSR QVTILEGQEV
EQLRQGSDSL ATMLSKVVPG MADSSHTITD YGQTLRGRNM LVLVDGVPLN TNRDSSRNLA
NINPADIEQI EVLRGSSAIY GSGAAGGIVS IRTKRPSGET RAETIVTGSA PLSRLRGAGL
GGEVQHYLSG GGEVVDYSVS LGAKHMGGAF DAKGNRIAPE PSQGDLFDSS IYNASAKIGF
KLDADQRLQL TASHYNAAQD TDYASDPAVA RLPAGTAAAR PIKGLVLADQ NQIRNTMLGL
DYENRDIAGS TLAAQLYYRD FFTRFAPFDA RAVPVRGANV DQSMQNSEVF GGRLTLKTPL
GASKKSLLIW GADFHQERTD MPIDIFDPRA YDASGGLVFN KTGRLVYMPP VTTRSIGAFA
QLQHQFSDQW SAEGGLRYDR AQASFNDFTP LSQSRVPNPQ SVNGGTVQYN AWTYNLGTVF
TPVKGQEFYA SYSQGFELPD IGVVVRNATP AFNLGNSNLQ AVKTNTYEMG WRGKFSNVMA
NLSVFQSRSN LGAVQSFNNG LSLLRTREKI HGLEGGLDYF SDDDHWSAGG SFTWMKGREL
PQAASGYQDM TGFRIPPLKL TAYVEYRPDA RWSHRLQATS YAAKDYRLDG KTGFGRYDTR
GYTTVDLISQ WKIDPKNRVS LGVENLFNRQ YFPLYSQLLR SNNNTSRLPA AGTVLKISYA
HTW
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