Gene Daci_5885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5885 
Symbol 
ID5751506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6540442 
End bp6541194 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content70% 
IMG OID641301017 
Producthypothetical protein 
Protein accessionYP_001566898 
Protein GI160901316 
COG category[S] Function unknown 
COG ID[COG3496] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.192815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.239276 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCC GCCCCCTCAT CGGCTTCGGC CATGTCTGGC ACCGCCGCCT GCGGCCTGTC 
GAGCATGCCT TCCGCTATCC CGGCTACTTT CTGATGCTGC CGCTGCGCAG CCTGCGCACG
CAGCCGGACG CCGCGCTGCG GCGCAACCGG CGGGGCTGGC TGAGCTTTCA TGACAGCGAC
CACGGCGAGG GCGGCTGCGA CGCACTGGCC TGGTTCGAGC AGCTGCTGCA CAGCGAAGGC
ATAGCCGACG CCGATGGCGA GGTCTGGCTG CACACCTTCC CGCGCGTGCT GGGCTACGTG
TTCAAGCCCG TGAGCTTTTG GTATGCGCAC CGCGCCGACG GCTCGCTGGC CGCCGTGCTG
GCCGAGGTCA ACAACACCTT TGGCGAGCGC CATGCCTATC TGCTGGCGGG GCCGGACCTG
GACTGGGGCC GCGAGCAGGT GGCGCGCAAG CAATTCCATG TCTCGCCGTT CTGCGAGGTG
CGCGGCGAGT ACCGCTTCCG CTTCGAGCGC GGCGAAGACC GCACCCTGGC GCGCGTGGAC
CTGCACGACG AGGACGGCCC GCTGCTGCAG ACCAGCGTGG GCGGCGTGCT GCACCCGCTC
GGCGGCGCCA CCGTGCGCCG CGCCTTCTTC GGCACGCCCC TGATGACGCT GGGCGTGGTC
GCCCGCATCC ACTGGCATGC GCTGCGCCTT TGGGCCAAGC GCGTGCCTTT CCATGGCAAA
CCCTCCGAGC CCAAGCGCTT CGTCACACGA TGA
 
Protein sequence
MTARPLIGFG HVWHRRLRPV EHAFRYPGYF LMLPLRSLRT QPDAALRRNR RGWLSFHDSD 
HGEGGCDALA WFEQLLHSEG IADADGEVWL HTFPRVLGYV FKPVSFWYAH RADGSLAAVL
AEVNNTFGER HAYLLAGPDL DWGREQVARK QFHVSPFCEV RGEYRFRFER GEDRTLARVD
LHDEDGPLLQ TSVGGVLHPL GGATVRRAFF GTPLMTLGVV ARIHWHALRL WAKRVPFHGK
PSEPKRFVTR