| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5869 |
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| Symbol | |
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| ID | 5751490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6526332 |
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| End bp | 6527150 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641301001 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001566882 |
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| Protein GI | 160901300 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1877] Trehalose-6-phosphatase |
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| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.967435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCAG ACGCTTTCCT GATGTCGATC CACGAAACCG GCAACCGATA CCCTGGCGCT
TCCATGGAAA CACCCCCATT GCCCACCTGC AGATCCGCCC TGTTCCTCGA CTTCGACGGC
ACGCTTGTGC CGCTGGCCGA GACCCCGGAC GTCATAGCAC CAGACCCCGC CCTGATCCCC
ATGCTGGCCA GGCTGCAAGG CATGCTGGGG GGGGCGCTGG CCATCGTCAC GGGGCGGCAG
CTCGAGGTGC TGGACCACTT TCTGGCGCCG CTGCATCTGC CCGCCGCCTG CGAGCACGGC
CTGCAGCGGC GGGATGGCGC AGGCCGCCTG CACCCGCAGC CATTGGCTCT GCCAGAGACC
GTGCTGCAGA TGTGCAATGC CTTGGCGGCC GATCATCCCC GCCTGCTGGT GGAGCGCAAG
CGCTCCTCGG TCGCACTGCA CTACCGGCGT GCGCCAGAGC TGGCGGCGCT GTGCCTGGAT
ACGTTGAGCC GCGCACTGAG GCACCTGCCC GGTCTGGAGC TGCTGCACGG CAAATGCGTG
CTGGAGGTCA GGCCTGCGGG CGTGGACAAG GGCCGCGCCA TTGCGGCCTT TCTGCGCGAA
GAGCCGTTCG CCGGCCGCAC CCCCGTGTTT GCCGGTGACG ATGTCACGGA CGAGAGCGGC
TTTGCCGTGG TGCAGGCGCA CGGCGGCATG GCGATCAAGG TGGGCGAAGG CGCAAGCGGT
GCCCGCCACC GGCTGGACAG CCCGCAGGCC GTGCACGCCT GGCTGCAGTG CGCATGCATG
CACCTGGCGG CACAGACCTG CGCGGAGGCC CTGCCATGA
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| Protein sequence | MAADAFLMSI HETGNRYPGA SMETPPLPTC RSALFLDFDG TLVPLAETPD VIAPDPALIP
MLARLQGMLG GALAIVTGRQ LEVLDHFLAP LHLPAACEHG LQRRDGAGRL HPQPLALPET
VLQMCNALAA DHPRLLVERK RSSVALHYRR APELAALCLD TLSRALRHLP GLELLHGKCV
LEVRPAGVDK GRAIAAFLRE EPFAGRTPVF AGDDVTDESG FAVVQAHGGM AIKVGEGASG
ARHRLDSPQA VHAWLQCACM HLAAQTCAEA LP
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