Gene Daci_5854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5854 
Symbol 
ID5751475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6508674 
End bp6509675 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content69% 
IMG OID641300986 
Productprotein-disulfide isomerase-like protein 
Protein accessionYP_001566867 
Protein GI160901285 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGAC CGAGATTGCC GCTGCGCCCT GAGCACGGAG GCGGGACCGG CCCCCGCTTT 
CAAGACTGCC TGCCGCGCCG GGCGCAAGCC CTCCTCCCCC CTGCCCCGCT CGCCCTGGCT
GTCTGCAATG ACGACTGCCC AGCGCCGATG CGCAGCATCT GCAAGGGTGT CAATGACAAT
CAGCGGCGTG CGAAGCCCAT GGGCTGCAAC GCGGCGGCAA CGGCGTGTGG CCGGTCGGCC
GTCGTGTGCG AGATTGCCGC AAGCGATTTC CTGGACCGAT GGAACGCGGC GGATGCACTC
CGACTCACAC CGTCCGCCGC TGTTGCCACA GCACCAGGCG TTGCACGCTT GTCGCGCAGC
GCCGCCCCAT CATTCATTCA ATCGTTTCAA GGAGTTCCCA TGCATCTTCA ACGCACCGTC
CTTTTTGCAG GCATGGCTGC CAGCCTCTTT CTGGCGGCGG GCAGGGCCAC GGCCGCAGAA
GGTCCTGCCA CGGCCCAGGC CCCCCAGGCC AAGGCCCAGA CCGCCAAGCC GGCGGGCGAC
ACCGTGCAGT CGCAGCTGGA GGCCTCCACC TGGGTGCCCG ACGGCAAGGC CGATGCGCCG
CGCGTGATCT ACACCTTCAC CGACCCCAAC TGCAAGTACT GCCACAAGTT CTGGGAGGCC
GCGCGTCCCT GGGTGGACGC AGGCAAGGTG CAGCTGCGCC ACATCCTGGT GGGCGTGATC
CGGGACGACA GCCCCGCCAA GGCCGCCGCC ATCCTGCAGG CCCCGGACCG CGCGGCCGCA
CTGATGGAGC ACGAGAAGAA GTCCGCCCAG GGCGGCATAG CGCCCGCCTT CAGCGTCGGC
CCCGACGTGC GCAAGACGCT GGAGGCCCAC CGCAAGCTGA TGATGTCCCT GGGCTTCCGT
GGCACGCCGG GCATCGTGGT GATCGACAGC CAGGGCGGCA CCAAGAGCTA TGGCGGCATG
CCGCGCGATG CCGCCTTGCC CGAGGTGTTC GGAGCGCTGT GA
 
Protein sequence
MARPRLPLRP EHGGGTGPRF QDCLPRRAQA LLPPAPLALA VCNDDCPAPM RSICKGVNDN 
QRRAKPMGCN AAATACGRSA VVCEIAASDF LDRWNAADAL RLTPSAAVAT APGVARLSRS
AAPSFIQSFQ GVPMHLQRTV LFAGMAASLF LAAGRATAAE GPATAQAPQA KAQTAKPAGD
TVQSQLEAST WVPDGKADAP RVIYTFTDPN CKYCHKFWEA ARPWVDAGKV QLRHILVGVI
RDDSPAKAAA ILQAPDRAAA LMEHEKKSAQ GGIAPAFSVG PDVRKTLEAH RKLMMSLGFR
GTPGIVVIDS QGGTKSYGGM PRDAALPEVF GAL