Gene Daci_5812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5812 
Symbol 
ID5751433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6467321 
End bp6467674 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content69% 
IMG OID641300944 
ProductTonB family protein 
Protein accessionYP_001566825 
Protein GI160901243 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.686482 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.162663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGCA TGCGCTGCGC CATCCTTGCA TTGACCCTGG GCCTGCTGGC CGGCGGCCCG 
GCTGCGGCAG GCGTGGTGCA GCCTGTGCCC GACAGGCAGG CCAGCGAGAA CAAGATGCCG
GCCTATCCCA AGGAAGCCAG GCGGCTGGAG CAGGAAGGCA AGGTGGTGCT GCGGGTTCTG
GTGGGCGCCA GCGGAAAGGC ACTGGCCGTG GATGTGGCAG ACAGCAGCGG CTATCCTCTG
CTCGACCAGG AGGCGCTGGA CGCCGTGCGG ACGTGGCGCT TTGTCCCCGG CACGCGCGAC
GGCGTGCCGG ACAGCATGTG GACGCGCGTG CCCGTCACCT TCCTGCTGAA ATAG
 
Protein sequence
MPRMRCAILA LTLGLLAGGP AAAGVVQPVP DRQASENKMP AYPKEARRLE QEGKVVLRVL 
VGASGKALAV DVADSSGYPL LDQEALDAVR TWRFVPGTRD GVPDSMWTRV PVTFLLK