Gene Daci_5809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5809 
Symbol 
ID5751430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6464034 
End bp6464912 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content71% 
IMG OID641300941 
ProductABC transporter related 
Protein accessionYP_001566822 
Protein GI160901240 
COG category[R] General function prediction only 
COG ID[COG4586] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.186512 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCAGA TCCTCGTCCA CGACCTCCGC AAGACCTACC GCATCCATGA ACGCGACCCC 
GGCGTGATGG GCGCGCTGCG CGCGCTGGTG CATCCGCGCC ATCGCACGGT GCAGGCGCTG
GATGGCGTGT CGTTCGCACT GGAGCGTGGC GAGCTGCTGG GCTTCATCGG CCCCAACGGT
GCGGGCAAGT CCACCACCAT CAAGATCCTG TCGGGCATCC TGCGGCCCGA TGGCGGGCGC
GTGGAGGTGG ACGGGCGCGA CCCCTTCGCC GACCGCCAGC GCCATGTGGG CCGCATCGGC
GTGGTCTTCG GGCAGCGCTC GCAGCTGTGG TGGGACCTGC CCGTGGGCGA CGGCTTCAAC
CTGCTGCGAG ACCTGTACCG GGTCGATCCG CTGCGCTTTG CGCGCACCCG CGATGAGCTG
GTGGCCATGC TGAACCTGGA GCGGCTGCTG GACCAGCCCG TGCGCCAGCT GTCCCTGGGC
CAGCGCATGC GCGCCGAGAT CGCCGCGGCC CTGCTGCACG AGCCCGAGAT CCTGTTCCTG
GACGAGCCCA CCATCGGCCT GGACGCACCC TCCAAGCTGG CCGTGCGCGA GTTCGTGCTG
CGCGCCAACC GCGAGCGCGG CACCACGGTG CTGCTGACCA CGCATGACAT GCACGACATC
GAGGCGCTGG CCCGGCGCGT CATCGTCATC GGCCATGGCC GCGTGCTGGC CGACTGCGCG
GTCGATGCGC TGCGCGCCCA GGTCGTGGCG GCGCAGCGCG ATGGCACGGT CGAAGGCCAA
GGCGAAGGCG AAGGCGAAGG CGAGGGCGAG GGGCAGGACA TGGCCATCGA GGCCGTGATC
GCCCGCTTCT ACGCCATGCA TGGTGCCTCG GAGGTCTGA
 
Protein sequence
MPQILVHDLR KTYRIHERDP GVMGALRALV HPRHRTVQAL DGVSFALERG ELLGFIGPNG 
AGKSTTIKIL SGILRPDGGR VEVDGRDPFA DRQRHVGRIG VVFGQRSQLW WDLPVGDGFN
LLRDLYRVDP LRFARTRDEL VAMLNLERLL DQPVRQLSLG QRMRAEIAAA LLHEPEILFL
DEPTIGLDAP SKLAVREFVL RANRERGTTV LLTTHDMHDI EALARRVIVI GHGRVLADCA
VDALRAQVVA AQRDGTVEGQ GEGEGEGEGE GQDMAIEAVI ARFYAMHGAS EV