Gene Daci_5807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5807 
Symbol 
ID5751428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6462338 
End bp6463153 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content71% 
IMG OID641300939 
Producthypothetical protein 
Protein accessionYP_001566820 
Protein GI160901238 
COG category[R] General function prediction only 
COG ID[COG3694] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.330732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGC AAAAAGGATC GCTGTCCATG TTCCTGCGCC TGGCGCTGGC CTCGCTGGGC 
GGGCAGGCGC GCTACCCGGC CTCGGCGCTG ATGCTGACCC TGGGCCAGTT CCTGGTCACG
GGCATCGAGG TCATCGCCGT CTGGGCGCTG TTCCACCGGT TTGGCGAGGT GCAGGGCTGG
CGCATCGGCG AAGTGGCCGT GTTCTATGGC CTGGTGAACT GCATGTTCGC CCTGGCCGAT
GCGCTGGGCC GGGGCTTCGA CGTGCTGGGC ACGCAGTTCC TGCGCACCGG CGCCTTCGAC
CGCCTGTTGC TGCGTCCGCG CCCCGTGTGG CTGCAGCTCA TGGGCCATGA CGTGCGCATC
AGCCGCCTGG GCCGCCTGCT GCAGGGCCTG CTGGTGCTGG GCTTTGCCAC GGCCCAGGGC
GCCGTGGCGT GGACGCCCCA GGCCGTCGCC GTGGCGCTGT TCGCCGTGGC GGGTGGCGTG
GCGCTGTTCC TGGGCATCCT GGTGCTGCAG GGCGCGCTCT CGTTCTGGAC CGTGGAAAGC
CTGGAAGCCG CCAATGTGCT GAGCTACGGC AGCGTCGAGG CCGCCCAGTA CCCGCTGGCC
CTGTACGCGC AGTGGTTTCG CCGCCTGCTG ACCTTCGCCG TGCCGCTGGC CTGCGTGGCC
TACTACCCGG CGCTGGCCGT GCTGGGCAAG CCCGACCCGC TGGGCGCGCC GGCCTGGCTG
GGCTGGGTCT CGCCGCTGGC CGGCTTTGCC TTCCTCTGGC TGGCCTCGGG CGCCTGGCGC
ATGGGAGTGA GGCATTACGC GTCCACGGGC AGTTGA
 
Protein sequence
MAKQKGSLSM FLRLALASLG GQARYPASAL MLTLGQFLVT GIEVIAVWAL FHRFGEVQGW 
RIGEVAVFYG LVNCMFALAD ALGRGFDVLG TQFLRTGAFD RLLLRPRPVW LQLMGHDVRI
SRLGRLLQGL LVLGFATAQG AVAWTPQAVA VALFAVAGGV ALFLGILVLQ GALSFWTVES
LEAANVLSYG SVEAAQYPLA LYAQWFRRLL TFAVPLACVA YYPALAVLGK PDPLGAPAWL
GWVSPLAGFA FLWLASGAWR MGVRHYASTG S