| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5792 |
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| Symbol | |
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| ID | 5751413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6444881 |
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| End bp | 6446806 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641300924 |
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| Product | SufS subfamily cysteine desulfurase |
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| Protein accession | YP_001566805 |
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| Protein GI | 160901223 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0152868 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCGTGT CTGCAATCAC CTCCGTGGCG CCCCAGGCGC CCTTCGACCC CGAGGCGCTG
GCGCGCATGG CCAACGCCCT GTTCTCCGCC GCACCGGGAT CGGCTCCTGC CCTGCCGGGT
CTTCCGGGTC TTCCGGGTCT TCCCGGCCTG CCTGCTGGCG TGCAGGCACC CGTGAACGTG
GCGCCCCCGG GCTCGCCGCT GGCCAGCCCG GCAGGCCTGG GCCCCGGCGT GCCGGGCACG
CCCATCCCGC AGGGCCTGGC GCCGGGCAGC AACCTGCTGC CGGCCTCGCC CGCGCCGCTG
GCCTCGTTGG CCCACCGCGC GCCCGCGCTG CTGCCCCATG CCCAGGCCGG CAACGGCGTG
CCCGACCATG TCGTGAGCGC CCTGCCCGCC TACGAGCCGC GCCTGGGATC GCAGGTGCTG
GGCGTGCCCC AGCGCCAGGG CGATCCGCTG GATGCGCTGG CCGCGCTCCC GTTCACGGCA
CCTGCTGCAC CTGCGACACC TGCTGCATCT GCGGCACCCG CCGTGCCGCG CATCGGCGTT
CCCACCGAAG GGCCCGGCAT TGCGTCCACC GTGCCTTCGG CCGAGCCGCG CTTTTACTTT
GTCGATCCCG TGGTGCTGCC CGCCGGCTAC ACCACGCCGG CCCATCCGCT GCAGCGCCAG
CAGGCTTCGC ACGGGGCAAG GCATGGCACG GCCGGCGTGC AGGCGCCCTT CGACGTGCAT
GCCGTGCGCC GGGACTTTCC CATCCTGTCC GAGCGCGTCA ACGGCCGTCC GCTGGCCTGG
CTGGACAACG CGGCCACCAC GCACAAGCCG CGCGCGGTGA TAGAGCGCAT CCGCCACTTC
TACGAACACG AGAACTCCAA CATCCACCGC GCAGCCCATG AACTGGCCGC GCGCGCCACC
GACGCCTACG AGGGCGCGCG CGAGCGCGTG CGCCGCTTCA TCAACGCGCC CGACGTGAAC
GAGGTCATCT TCGTGCGCGG CACCACCGAG GCCATCAACC TGGTGGCCAA GAGCTGGGGC
TGGCAGCATG TGGGCGAGGG CGACGAGATC ATCGTCTCCC ACCTGGAGCA CCACGCCAAC
ATCGTGCCCT GGCAGCAGCT GGCGGCCGCC AAGGGCGCGA AGATCCGCGT GATCCCGGTG
GACGACTCGG GCCAGGTGCT CATCGATGAA TACCGCAGGC TGCTGAACCC GCGCACCAAG
ATCGTCTCCG TCACCCAGGT CTCCAACGCG CTGGGCACGG TCGTGCCCGT GCGGCAGATC
GTGGAGCTGG CCCACCAGGC GGGCGCCCGG GCTCTGGTCG ATGGCGCGCA GTCGGTCTCG
CACATGGCCG TGGACGTGCA GGCCATCGGT GCGGACTTCT TCGTGTTCTC GGGCCACAAG
GTCTTCGGCC CCACGGGCAT CGGCGTGGTC TGGGGACGGC GCGAGGTGCT GGAGGACATG
CCGCCCTGGC AGGGCGGCGG CAACATGATC GCCGACGTGA CCTTCGAGAA AACCGTCTAC
CAGCCCCTGC CCAACACCTT CGAGGCCGGC ACCGGCAACA TTGCCGACGC CGTGGGCCTG
GGCGCCGCCA TCGACTACGT GCAGGCCCTG GGCATGGAGC GCATCGCGCG CTACGAGCAC
GATCTGCTGC AGTACGGCAC GCAGGCGCTG GCGCCCATCC CCGGCCTGCG CCTGATCGGC
ACGGCGGCCG ACAAGGCCAG CGTGCTGTCC TTCGTGCTCA AGGGCTGGAC CACGGCCGAG
GTGGGCGAGG CGCTCAACGC CGAAGGCATC GCCGTGCGCA CCGGCCACCA CTGCGCCCAG
CCCATCCTCA GGCGCTTCGG CGTGGAGACC ACGGTGCGGC CCTCGCTGGC CTTCTACAAC
ACCACCGAGG AAATCGACCG GCTGGCGGCC GTGGTGCAGG GGCTGGCGGC GCGCAGGCGG
GGTTGA
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| Protein sequence | MTVSAITSVA PQAPFDPEAL ARMANALFSA APGSAPALPG LPGLPGLPGL PAGVQAPVNV
APPGSPLASP AGLGPGVPGT PIPQGLAPGS NLLPASPAPL ASLAHRAPAL LPHAQAGNGV
PDHVVSALPA YEPRLGSQVL GVPQRQGDPL DALAALPFTA PAAPATPAAS AAPAVPRIGV
PTEGPGIAST VPSAEPRFYF VDPVVLPAGY TTPAHPLQRQ QASHGARHGT AGVQAPFDVH
AVRRDFPILS ERVNGRPLAW LDNAATTHKP RAVIERIRHF YEHENSNIHR AAHELAARAT
DAYEGARERV RRFINAPDVN EVIFVRGTTE AINLVAKSWG WQHVGEGDEI IVSHLEHHAN
IVPWQQLAAA KGAKIRVIPV DDSGQVLIDE YRRLLNPRTK IVSVTQVSNA LGTVVPVRQI
VELAHQAGAR ALVDGAQSVS HMAVDVQAIG ADFFVFSGHK VFGPTGIGVV WGRREVLEDM
PPWQGGGNMI ADVTFEKTVY QPLPNTFEAG TGNIADAVGL GAAIDYVQAL GMERIARYEH
DLLQYGTQAL APIPGLRLIG TAADKASVLS FVLKGWTTAE VGEALNAEGI AVRTGHHCAQ
PILRRFGVET TVRPSLAFYN TTEEIDRLAA VVQGLAARRR G
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