| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5752 |
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| Symbol | |
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| ID | 5751373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6405526 |
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| End bp | 6407766 |
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| Gene Length | 2241 bp |
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| Protein Length | 746 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641300884 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001566765 |
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| Protein GI | 160901183 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0523831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000000276247 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCTTCG CTTCTTCGGC CGCCGATTCC TCCGGCCTTC TCTCTGTTCT CCCTCTTGTC
TCCAGCCTGC GGCCCGCAGC GGCCGCCGTC CTGCTGGCCA GCTGCGCTGC AGCGGCCGGC
GCCGCGCAGG AGCCGGCTTC GGGCCGCTCC GCGGACTCCG CCGACGATGC GCTGGATGCC
GTCTTCGTGA CCGCCACCGC GCGGCCCGAG GCGCGCAGCC GCATCGCGGG CACCACGCAG
ACCATCGACC GCGAGGCCAT AGAGCGCTCC AGCGCGCGCT CGGTCACCGA CCTGCTGGCC
GAGAACGCCG TGGGCTTTCT CAGCGAATGG ACGGCGGCCC AGACCTCGAT GAACCTGCGC
GGCGCCTCCA CCGACGGCCA GGGGCGTGAC TTCCGCAGCC AGGTGCTGGT GCTGGTCAAC
GGCCGGCGCG CGGGCACGGC CAACCTGTCC AAGCTCAGCC CCTCGGATGT GGAGCGCATC
GAGATCGTGC GCGGCCCGTC CTCGGTGATC TACGGCAGCC AGGCCATGGG CGGGGTGGTC
AACATCATCA TGAAGACGGG GGCGACGGCG CCCGGCACGC GCGCCCAGGT CCAGGCCGGT
TCATGGGACC TGTGGCGCAC CGATGCGCAG ACGGCCGGCG CCAATGACCG CTTCGACTGG
TACTTCGGCG TGAGCGCAGG CGGGCGCGGC GACTACGAGT CGGGCGACGG CGGCACGCGC
ATGGAGAACA CGGGCTGGAA GCGGCGCGGC GCCAGCGGCG CCCTGGGCTG GCAGCTGCAC
GAGCTGCACC GCGTGGAGCT GCAGCTGCGC ACGGACGGCA TCTACAACGC GGGCTTTCGC
GGATCGGGCG CCAACATCTA CAGCCGAGAC AACCGCAGCA ACCGCTCGCT GGACCTGACC
TACGAGGGCG CGCTGCCCGG CCAGCGCCTG AGCTGGACGA CCCACCTCTA CAGCCTGGTC
GATACCGATG AGTTCAACTG GGCATCGCCC GTGATCCGCT CGGGCAACAG CGCCGTGCCC
GGCACGGCGC GCGACTACAA CCACCGCCAG CTGGACGCCA CGGGCCTGCG CTTTCAGCCG
CGCCTGCGTG TCAGCCAGAC CAATGACCTG CTGATGGGCT TTGACTGGGA GCGCAGCAAG
CTGCGCTCCG ACCGCCTGCG CGTGGCCATG CCGGGCGGCC CGGCGGGCCA GGTCGCGCCC
TACGATAACA ACCAGACCGA GCAGGTGCAC GCGCTGTACT TCGAGGACGC GCAGACCCTG
TTCGACGACC GCCTGACCCT GCGTGCCGGC CTGCGCAAGA CCTGGGGCAC GACGCGTTTC
GACGAGACGC CCAACCTGGC CCTGGCCCAG GCCAGCACGC GCGACTACGA CAACCACACC
TGGTCGGCCG GCGCCACCTG GAAGGCCACG GACCGGCTCA CGCTGCGCGC TGCGGCCTCC
ACGGGGTTCC GCGCGCCCAC GGCCACGGAG CTGGCCTCGG ACTTCACGGC CGTCGGCGGT
GGCCGCACCT TCGGCAACCC CAACCTCAAG CCCGAGACCA GCCGCCAGAT CGAGGTCGGC
GCCGCGCTGC AGCAGCCCGG CTGGCGCGTG GATGCGGCCC TGTTCCAGAA CACCATCAGC
GACCGCATCA TCACCGTCTC GCGCGGGGCG ACGACCAACA CCTCGGACTA CGCCAACAAC
GCGGCCGACA TCGTGGCGCG CGGCCTGGAA ATGCAGGCCG ACATGGACCT GGCGCGGGCG
CTGAACCTGA CGGGCCACCA GCTCAAGGCC TGGGCTGGCG GCTACTACCA CTTCAGCATG
CGGGACAAGG GATCGCCAGC CTCGGCCAAC ACCGACAAGG TGCAGCGCAT GTACCGCTAC
GAGGCCTCGG CCGGCGTGCG CTACGGGCGC GGCAGCGGGC GCCTGCAGGG CGACTGGAGC
CTGCAGCTGT CCACGCTGCT GCGCGGTCCC ATGTGGTACG ACACGGAAGA GGCGCTGCTC
ATCCCGCAGG GCGAGCCCAG CAGCACCTTC ATCCACCGCA AGGGCGCCTT CACCATCTGG
AACCTGCGTG CCGACTACCG CGTGTCGCGC GGCGTCAAGC TGTTCGCAGC CGTCAACAAC
CTGTTCGACC TGAACCGCCA TCCCATCTTC ATCGCACTGG ACCGCGCGCC CTGCATCGCC
AACCCGGCGT ACCAGAACGG CGGCTGCGGA ACGTCGATGG CGGGCCGCGA ACTCATGGTC
GGCCTGCAAG CAGAGTTTTG A
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| Protein sequence | MRFASSAADS SGLLSVLPLV SSLRPAAAAV LLASCAAAAG AAQEPASGRS ADSADDALDA
VFVTATARPE ARSRIAGTTQ TIDREAIERS SARSVTDLLA ENAVGFLSEW TAAQTSMNLR
GASTDGQGRD FRSQVLVLVN GRRAGTANLS KLSPSDVERI EIVRGPSSVI YGSQAMGGVV
NIIMKTGATA PGTRAQVQAG SWDLWRTDAQ TAGANDRFDW YFGVSAGGRG DYESGDGGTR
MENTGWKRRG ASGALGWQLH ELHRVELQLR TDGIYNAGFR GSGANIYSRD NRSNRSLDLT
YEGALPGQRL SWTTHLYSLV DTDEFNWASP VIRSGNSAVP GTARDYNHRQ LDATGLRFQP
RLRVSQTNDL LMGFDWERSK LRSDRLRVAM PGGPAGQVAP YDNNQTEQVH ALYFEDAQTL
FDDRLTLRAG LRKTWGTTRF DETPNLALAQ ASTRDYDNHT WSAGATWKAT DRLTLRAAAS
TGFRAPTATE LASDFTAVGG GRTFGNPNLK PETSRQIEVG AALQQPGWRV DAALFQNTIS
DRIITVSRGA TTNTSDYANN AADIVARGLE MQADMDLARA LNLTGHQLKA WAGGYYHFSM
RDKGSPASAN TDKVQRMYRY EASAGVRYGR GSGRLQGDWS LQLSTLLRGP MWYDTEEALL
IPQGEPSSTF IHRKGAFTIW NLRADYRVSR GVKLFAAVNN LFDLNRHPIF IALDRAPCIA
NPAYQNGGCG TSMAGRELMV GLQAEF
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