Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5740 |
Symbol | |
ID | 5751361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 6387676 |
End bp | 6389337 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641300872 |
Product | ABC transporter related |
Protein accession | YP_001566753 |
Protein GI | 160901171 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0750761 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATGCAA AGCGGCAAGG AACTGCGTTG GCATCCATGA ACTGCGATAT GACGAATACC ACGATCACGC TCGACGGCGT TTCCTGCGTG CTGCCCGATG GCAGCCCCCT TTTCTCCGAT CTTTCCGACA CCCTGGACCA CCGCCGCACC GGCCTGGTGG GGCGCAACGG CGTGGGCAAG TCGCGGCTGG CGTGCATCCT GGCCGGGCTG GATGCGCCCT CGCAGGGCCG CTGCCTGCGC TCGGGGCAGG TGCTGTACCT GGCCCAGCGC ACGGACTGGC ATGACCAGCC TTCGGTGGCG GCGCTGGCCG GGCTGCAGCC CGCGCTGGAG GCGCTGGCGC GCATCGAGGG CGGCAGCTGC GATGCCCGGG ACTTCGAGCG GCTGGCCGAC CGCTGGGATC TGCGCCAGCG CCTGCAGGCC CAGCTGGAGC TGGCGGGCCT GGGCCATCTG CGTGCCGATA CGCCGGGCCA CGCCCTCAGC GGCGGCGAGG CCATGCGCGT GGCCCTGGCG GGCGCGCTGC TGTCTGGCGC CGACCATCTG GTGCTGGACG AGCCCAGCAA CCACCTGGAC CGCGAAAGCC GGCAGGCCCT GGCCGCGCAA CTGCAGCGCT GGCCCGGTGG CCTGGTCGTG GTCAGCCATG ACCGCAGTCT GCTGCAGGGC ATGGAACGCA TCGTGGAGCT GTCGCCGCAG GGGCTTCGCA GCTACGGCGG CGGCTACGCC TTCTATGCCG AAGCCAAGGC GCGCGAGATG GCCTCGGCGG TGCAACTGCT GGAGCAGCGC AAGCTGGAGC GGCGCCGCGA AACGCAGCAG CTGCGCGAGC AGCAGGAGCG CCAGCAGCGC CGGGAGGCGC GCGGCCGCCG CCAGGGCCAG GAGGCCAACC AGGCGCGCAT TCTGCTGGAC CGGCAAAAGG AGCGCAGCGA GGCGTCGGCC GGCCGCCTGC GCCGCCAGCA TGCAGACACA CGCGAGGCGC TGGACCAGCG CGTGCGCGAG GCGGCGCGCC AGATCGACCT GCAGGCCGGC ATCCGCATGC AGGCGCCGCC CCCGGCCGGT GCTCCCTGCG ACGTGGTGGC GCTGCTGGAC GATGTGCTGC TGCCGTTTTC GTTGTCCACG GGGCCGCGCC TGAACCTGTC TCTGTACGGC GGCCAGCGCC TGGCCGTGAC CGGTCCCAAC GGCTGCGGCA AGACGCGCCT GCTCGATGTG CTGTCGGGCC GCCTTGCGCC CCAGGCGGGC GAGGTGCGCC GCATGCAGGC CTGTGCCTAC CTGGACCAGC GCCTGTCCCT GTTGCAGCCC GGGCGCACGG TGATGGAGCA GTTGCAGGAC GCCTGCCCCG GCACCCCCGT GGATGTGCTG CGCACGCGCC TGGCCTGGCT CGGACTGGCG GCCCGGCAGG TGGAGCAGCC CGCGGACCGG CTCAGCGGCG GCGAGCAGCT CAAGGCCGCC CTGGCCTGCG CGCTGCAGGC CGAGCCGCCC GCGCCCCTGC TCCTGCTGGA CGAGCCCTGC AACCACCTGG ACCTGCCTTC CCTGCAGGCG CTGGAGGCCA TGCTGCGCGG CTATGCCGGC ACGCTGGTCG TGGTCTCGCA TGACGAGGAT TTTCTGCAGG CCATCGGTCT GACCGACCGC CTGGTGTGGT CGCCGCAGGG CTGGCGAATG GAGTCCGCCT AG
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Protein sequence | MHAKRQGTAL ASMNCDMTNT TITLDGVSCV LPDGSPLFSD LSDTLDHRRT GLVGRNGVGK SRLACILAGL DAPSQGRCLR SGQVLYLAQR TDWHDQPSVA ALAGLQPALE ALARIEGGSC DARDFERLAD RWDLRQRLQA QLELAGLGHL RADTPGHALS GGEAMRVALA GALLSGADHL VLDEPSNHLD RESRQALAAQ LQRWPGGLVV VSHDRSLLQG MERIVELSPQ GLRSYGGGYA FYAEAKAREM ASAVQLLEQR KLERRRETQQ LREQQERQQR REARGRRQGQ EANQARILLD RQKERSEASA GRLRRQHADT REALDQRVRE AARQIDLQAG IRMQAPPPAG APCDVVALLD DVLLPFSLST GPRLNLSLYG GQRLAVTGPN GCGKTRLLDV LSGRLAPQAG EVRRMQACAY LDQRLSLLQP GRTVMEQLQD ACPGTPVDVL RTRLAWLGLA ARQVEQPADR LSGGEQLKAA LACALQAEPP APLLLLDEPC NHLDLPSLQA LEAMLRGYAG TLVVVSHDED FLQAIGLTDR LVWSPQGWRM ESA
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