Gene Daci_5731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5731 
Symbol 
ID5751352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6378827 
End bp6379576 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content67% 
IMG OID641300863 
Producthypothetical protein 
Protein accessionYP_001566744 
Protein GI160901162 
COG category[S] Function unknown 
COG ID[COG3819] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.195243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.543565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACTG ACGTCAATCT CTGGCCGCTT ATCGGAGTGG CCATCATCGT TGCGGGCTTC 
GTGCTGCGCT TCAATCCCAT GCTGGTCGTG ATCGTCACGG CCATCGGCAC GGCACTGGCG
GCGGGCTTCC CCGTCGACAA GGTGCTGGCC ACCATTGGCA CGGGCTTCAT CAAGACGCGC
AACCTGCCGC TGATCATCCT GCTGCCGCTG GCCGTGATCG GCCTGCTGGA GCGCCATGGC
CTGCGCCAGC ACGCGCAGAA CTGGATCAGC TCCATCAAGT CGGCCACCGC AGGCCGCCTG
CTCATCGTCT ACCTGGCCGC ACGCCAGCTG ACGGCCGCCG TGGGCCTGAC CAGCCTGGGC
GGGCATCCGC AGATGGTGCG CCCGCTGCTG GCGCCCATGG CCGAAGGTGC GACCCAGTCG
CGCTTCGGCA TCCTGCCCGC CAAGGTGCGC GACAAGCTGC GCGCCTACTC GGCCGCCACG
GACAACGTGG GCCTGTTCTT CGGCGAGGAC ATCTTCGTGG CCTTCGGCGC CATCGTGCTG
ATGACCACCT TCCTGAAGGA AGCCGGCATC GAGGTCGAGC CCATCCACGT CGCGCTGTGG
GGCATTCCCA CGGCCATCTG CGCCTTCGTG ATCCATGCCT GGCGCCTGCG CCGCCTGGAC
CGCATGCTGG AGCGCGAACT GGCCCAGTAC AAGGCCGGTG TCGAGGCCGA CGCAGCCAAC
GCCAACGCCA CCCAAGCCAA GGGAGCCTGA
 
Protein sequence
MLTDVNLWPL IGVAIIVAGF VLRFNPMLVV IVTAIGTALA AGFPVDKVLA TIGTGFIKTR 
NLPLIILLPL AVIGLLERHG LRQHAQNWIS SIKSATAGRL LIVYLAARQL TAAVGLTSLG
GHPQMVRPLL APMAEGATQS RFGILPAKVR DKLRAYSAAT DNVGLFFGED IFVAFGAIVL
MTTFLKEAGI EVEPIHVALW GIPTAICAFV IHAWRLRRLD RMLERELAQY KAGVEADAAN
ANATQAKGA